OMERI10G10120 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI10G10120 T276168_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.671 0.674
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.671 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI10G10120.1 Myb 114 161
OMERI10G10120.1 Myb 167 211

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.852
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.852
OS10G0478300 Oryza sativa OS10G0478300 I 0.852
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.838
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.782
Si040527m.g Setaria italica Si040527m.g I 0.765
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.765
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.765
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.762
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.744
F775_20725 Aegilops tauschii F775_20725 I 0.720
GRMZM2G147346 Zea mays GRMZM2G147346 I 0.720
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.716
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.712
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.712
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.704
OBART02G28790 Oryza barthii OBART02G28790 I 0.704
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.704
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.704
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.704
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.704
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.704
OS02G0695200 Oryza sativa OS02G0695200 I 0.704
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.703
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.703
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.703
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.702
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.699
OB02G35920 Oryza brachyantha OB02G35920 I 0.698
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.695
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.695
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.695
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.694
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.693
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.691
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.691
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.691
F775_14744 Aegilops tauschii F775_14744 I 0.691
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.691
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.689
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.689
Si010384m.g Setaria italica Si010384m.g I 0.688
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.688
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.687
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.687
OS04G0594100 Oryza sativa OS04G0594100 I 0.687
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.687
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.687
OB04G30570 Oryza brachyantha OB04G30570 I 0.687
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.687
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.687
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.687
OBART04G23680 Oryza barthii OBART04G23680 I 0.687
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.687
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.687
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.686
MYB14 Arabidopsis thaliana AT2G31180 I 0.686
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.686
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.686
Si018182m.g Setaria italica Si018182m.g I 0.686
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.685
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.685
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.684
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.684
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.684
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.684
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.684
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.683
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I 0.683
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.682
Si017704m.g Setaria italica Si017704m.g I 0.682
TCM_026197 Theobroma cacao TCM_026197 I 0.679
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.678
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.678
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.678
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.678
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.678
Pm015303 Prunus mume Pm015303 I 0.678
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.678
F775_18231 Aegilops tauschii F775_18231 I 0.678
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.678
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.678
GRMZM2G095904 Zea mays GRMZM2G095904 I 0.676
OB04G25860 Oryza brachyantha OB04G25860 I 0.675
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.675
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.675
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.675
Si010814m.g Setaria italica Si010814m.g I 0.675
PRUPE_ppa026315mg Prunus persica PRUPE_ppa026315mg I 0.674
Pm011057 Prunus mume Pm011057 I 0.674
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.674
Bo6g122640 Brassica oleracea Bo6g122640 I 0.674
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.674
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.673
MYB58 Arabidopsis thaliana AT1G16490 D 0.671
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.670
PK08038.1 Cannabis sativa PK08038.1 I 0.668
VIT_19s0085g00050 Vitis vinifera VIT_19s0085g00050 I 0.668
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.667
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.666
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.666
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.666
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.666
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.665
POPTR_0005s09930 Populus trichocarpa POPTR_0005s09930 I 0.665
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I 0.665
MYB30 Oryza sativa OS02G0624300 I 0.665
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I 0.665
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.665
BGIOSGA006005 Oryza indica BGIOSGA006005 I 0.665
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.665
TCM_032927 Theobroma cacao TCM_032927 I 0.665
POPTR_0007s08190 Populus trichocarpa POPTR_0007s08190 I 0.665
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.665
Aquca_030_00245 Aquilegia coerulea Aquca_030_00245 N 0.664
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.663
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.663
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.663
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.662
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.662
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.662
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.662
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.662
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.661