ONIVA02G28010 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA02G28010 T276230_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.703 0.699
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.703 0.699
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.703 0.699
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH

DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.688 0.710
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH

DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.688 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA02G28010.1 Myb 15 62
ONIVA02G28010.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

571 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.000
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.000
Ciclev10006559m.g Citrus clementina Ciclev10006559m.g N 0.000
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.000
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.000
Ciclev10007090m.g Citrus clementina Ciclev10007090m.g N 0.000
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.000
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.000
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.000
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.000
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.000
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.000
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.000
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.000
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.000
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.000
Pm008734 Prunus mume Pm008734 N 0.000
29693.m002041 Ricinus communis 29693.m002041 N 0.000
29693.m002042 Ricinus communis 29693.m002042 N 0.000
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.000
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.000