ONIVA05G06820 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA05G06820 T276296_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN

NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.881 0.894
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW

WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.881 0.894
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW

WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.881 0.894
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN

NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.860 0.872
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.842 0.915
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.824 0.851
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN

NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.824 0.851
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW

WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.824 0.851
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.821 0.872
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.813 0.851
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.811 0.851
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.811 0.894
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.799 0.809
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW

WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.799 0.809
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW

WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.799 0.809
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN

NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.781 0.851
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW

WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.781 0.851
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH

DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.709 0.681
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD

HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.709 0.681
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.704 0.809
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.704 0.809
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.704 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA05G06820.1 Myb 122 169

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

596 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.000
PK13672.1 Cannabis sativa PK13672.1 I 0.000
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.000
Ca_19000 Cicer arietinum Ca_19000 I 0.000
Cla020348 Citrullus lanatus Cla020348 I 0.000
Cla009230 Citrullus lanatus Cla009230 I 0.000
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.000
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.000
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.000
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.000
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.000
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.000
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.000
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.000
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.000
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.000
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.000
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.000
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.790
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.000
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.000
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.000
mgf009460m Mimulus guttatus mgf009460m I 0.000
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.000
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.000
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.000
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.000
Pm006046 Prunus mume Pm006046 I 0.000
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.000
30131.m007263 Ricinus communis 30131.m007263 I 0.000
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.000
SapurV1A.0333s0040 Salix purpurea SapurV1A.0333s0040 I 0.000
Si022762m.g Setaria italica Si022762m.g N 0.000
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.000
TCM_007672 Theobroma cacao TCM_007672 I 0.000
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.000