ONIVA09G04720 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA09G04720 T276370_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.817 0.872
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.817 0.872
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.817 0.872
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.817 0.872
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.751 0.809
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.749 0.830
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.749 0.830
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.749 0.830
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.749 0.830
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.749 0.830
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.749 0.830
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.745 0.787
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.745 0.787
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.745 0.787
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.739 0.830
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.739 0.830
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.739 0.830
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB

VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.678 0.723
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD

HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.678 0.723
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.676 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA09G04720.1 Myb 35 86

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

690 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29889.m003269 Ricinus communis 29889.m003269 I 0.000
AMTR_s00057p00042800 Amborella trichopoda AMTR_s00057p00042800 I 0.000
Aquca_003_00568 Aquilegia coerulea Aquca_003_00568 I 0.000
AT3G16940 Arabidopsis thaliana AT3G16940 I 0.000
CAMTA5 Arabidopsis thaliana AT4G16150 D 0.000
Bo5g123580 Brassica oleracea Bo5g123580 I 0.000
Bo8g043280 Brassica oleracea Bo8g043280 I 0.000
Bostr.19424s0974 Boechera stricta Bostr.19424s0974 I 0.000
Bostr.30275s0060 Boechera stricta Bostr.30275s0060 I 0.000
Bra022188 Brassica rapa Bra022188 I 0.000
Bra038040 Brassica rapa Bra038040 I 0.000
Cagra.0053s0009 Capsella grandiflora Cagra.0053s0009 I 0.000
Carubv10004090m.g Capsella rubella Carubv10004090m.g I 0.000
Carubv10012963m.g Capsella rubella Carubv10012963m.g I 0.000
cassava40488.m1 Manihot esculenta cassava40488.m1 I 0.000
Ca_02997 Cicer arietinum Ca_02997 I 0.000
chr4.CM0429.140.nd Lotus japonicus chr4.CM0429.140.nd I 0.000
Ciclev10004273m.g Citrus clementina Ciclev10004273m.g I 0.000
Cla009415 Citrullus lanatus Cla009415 I 0.000
Cucsa.325250 Cucumis sativus Cucsa.325250 I 0.000
Eucgr.H04035 Eucalyptus grandis Eucgr.H04035 I 0.000
evm.TU.supercontig_929.1 Carica papaya evm.TU.supercontig_929.1 I 0.000
fgenesh1_pg.C_scaffold_7002321 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7002321 I 0.000
fgenesh1_pm.C_scaffold_3001474 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3001474 I 0.000
gene10891-v1.0-hybrid Fragaria vesca gene10891-v1.0-hybrid I 0.000
GLYMA07G37090 Glycine max GLYMA07G37090 I 0.000
GLYMA09G04310 Glycine max GLYMA09G04310 I 0.000
GLYMA15G15350 Glycine max GLYMA15G15350 I 0.000
GLYMA17G03510 Glycine max GLYMA17G03510 I 0.000
Gorai.004G075100 Gossypium raimondii Gorai.004G075100 I 0.000
Gorai.005G065700 Gossypium raimondii Gorai.005G065700 I 0.000
Gorai.006G079000 Gossypium raimondii Gorai.006G079000 I 0.000
Gorai.011G198600 Gossypium raimondii Gorai.011G198600 I 0.000
Lus10016873.g Linum usitatissimum Lus10016873.g I 0.000
Lus10036455.g Linum usitatissimum Lus10036455.g I 0.000
Lus10037738.g Linum usitatissimum Lus10037738.g I 0.000
Lus10041126.g Linum usitatissimum Lus10041126.g I 0.000
MDP0000164873 Malus domestica MDP0000164873 I 0.000
MDP0000167705 Malus domestica MDP0000167705 I 0.000
MDP0000233860 Malus domestica MDP0000233860 I 0.000
mgf012030m Mimulus guttatus mgf012030m I 0.000
mgf013655m Mimulus guttatus mgf013655m I 0.000
MTR_2g034650 Medicago truncatula MTR_2g034650 I 0.000
MTR_4g121840 Medicago truncatula MTR_4g121840 I 0.000
OB07G20740 Oryza brachyantha OB07G20740 I 0.000
OGLUM07G13800 Oryza glumaepatula OGLUM07G13800 I 0.000
OLONG_014480 Oryza longistaminata OLONG_014480 I 0.000
ONIVA07G13300 Oryza nivara ONIVA07G13300 I 0.000
OPUNC07G13630 Oryza punctata OPUNC07G13630 I 0.000
orange1.1g002476m.g Citrus sinensis orange1.1g002476m.g I 0.000
ORUFI07G15090 Oryza rufipogon ORUFI07G15090 I 0.000
OS07G0490200 Oryza sativa OS07G0490200 I 0.000
PK20811.1 Cannabis sativa PK20811.1 I 0.000
POPTR_0008s10730 Populus trichocarpa POPTR_0008s10730 I 0.000
POPTR_0010s15160 Populus trichocarpa POPTR_0010s15160 I 0.000
PRUPE_ppa001493mg Prunus persica PRUPE_ppa001493mg I 0.000
SapurV1A.0050s0650 Salix purpurea SapurV1A.0050s0650 I 0.000
SapurV1A.0060s0130 Salix purpurea SapurV1A.0060s0130 I 0.000
Solyc01g060170.2 Solanum lycopersicum Solyc01g060170.2 I 0.000
Solyc12g099340.1 Solanum lycopersicum Solyc12g099340.1 I 0.000
TCM_021327 Theobroma cacao TCM_021327 I 0.000
Thhalv10020047m.g Eutrema salsugineum Thhalv10020047m.g I 0.000
Thhalv10024342m.g Eutrema salsugineum Thhalv10024342m.g I 0.000
VIT_05s0077g01240 Vitis vinifera VIT_05s0077g01240 I 0.000