ONIVA11G05280 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA11G05280 T276389_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.897 0.957
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.897 0.957
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.830 0.892
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.684 0.731
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA11G05280.1 Myb 14 61
ONIVA11G05280.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SMZ Arabidopsis thaliana AT3G54990 D 0.000
TOE2 Arabidopsis thaliana AT5G60120 D 0.000
PK16652.1 Cannabis sativa PK16652.1 I 0.000
Carubv10023614m.g Capsella rubella Carubv10023614m.g I 0.000
Carubv10018526m.g Capsella rubella Carubv10018526m.g I 0.000
Cagra.1742s0021 Capsella grandiflora Cagra.1742s0021 I 0.000
Cagra.1317s0005 Capsella grandiflora Cagra.1317s0005 I 0.000
Cagra.0716s0040 Capsella grandiflora Cagra.0716s0040 I 0.000
Bostr.26833s0222 Boechera stricta Bostr.26833s0222 I 0.000
Bostr.23794s0149 Boechera stricta Bostr.23794s0149 I 0.000
Bostr.0697s0115 Boechera stricta Bostr.0697s0115 I 0.000
Carubv10026292m.g Capsella rubella Carubv10026292m.g I 0.000
Eucgr.G02793 Eucalyptus grandis Eucgr.G02793 I 0.000
Thhalv10013367m.g Eutrema salsugineum Thhalv10013367m.g I 0.000
Thhalv10010513m.g Eutrema salsugineum Thhalv10010513m.g I 0.000
MDP0000285955 Malus domestica MDP0000285955 I 0.000
MDP0000281079 Malus domestica MDP0000281079 I 0.000
Lus10040365.g Linum usitatissimum Lus10040365.g I 0.000
Gorai.011G241700 Gossypium raimondii Gorai.011G241700 I 0.000
Gorai.003G139800 Gossypium raimondii Gorai.003G139800 I 0.000
gene23316-v1.0-hybrid Fragaria vesca gene23316-v1.0-hybrid I 0.000
Cucsa.165940 Cucumis sativus Cucsa.165940 I 0.000
Pm018608 Prunus mume Pm018608 I 0.000
SMZ Arabidopsis lyrata fgenesh2_kg.5__1910__AT3G54990.1 I 0.000
SNZ Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001673 I 0.000
Bra020262 Brassica rapa Bra020262 I 0.000
Bra007123 Brassica rapa Bra007123 I 0.000
Bra002510 Brassica rapa Bra002510 I 0.000
Bo9g141100 Brassica oleracea Bo9g141100 I 0.000
Bo6g068410 Brassica oleracea Bo6g068410 I 0.000
SNZ Arabidopsis thaliana AT2G39250 I 0.000
GLYMA02G09600 Glycine max GLYMA02G09600 I 0.000
GLYMA10G22390 Glycine max GLYMA10G22390 I 0.000
Cla020387 Citrullus lanatus Cla020387 I 0.000
Ca_26761 Cicer arietinum Ca_26761 I 0.000
Sb10g001490 Sorghum bicolor Sb10g001490 I 0.000
PRUPE_ppa018704mg Prunus persica PRUPE_ppa018704mg I 0.000
PGSC0003DMG400012038 Solanum tuberosum PGSC0003DMG400012038 I 0.000
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.000
MTR_1g049140 Medicago truncatula MTR_1g049140 I 0.000
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.000
Al_scaffold_0003_2798 Arabidopsis lyrata Al_scaffold_0003_2798 I 0.000