OPUNC01G07980 (Oryza punctata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OPUNC01G07980 T276408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN

NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.738 0.799
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR

YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.738 0.799
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.733 0.828
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN

NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.715 0.836
MYB3R4
M07125_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN

NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R4_col_a
0.693 0.776
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC01G07980.1 Myb 51 97
OPUNC01G07980.1 Myb 103 149
OPUNC01G07980.1 Myb 155 199
OPUNC01G07980.2 Myb 51 92
OPUNC01G07980.2 Myb 98 144
OPUNC01G07980.2 Myb 150 194

Links

Other Myb/SANT family TFs
Other Oryza punctata TFs

Invalid Input OrderBy

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action