OPUNC05G16800 (Oryza punctata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OPUNC05G16800 T276515_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR

YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.721 0.814
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN

NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.700 0.779
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN

NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.694 0.750
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR

YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.694 0.750
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.668 0.765
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC05G16800.1 Myb 64 102
OPUNC05G16800.1 Myb 108 154
OPUNC05G16800.1 Myb 160 205
OPUNC05G16800.2 Myb 64 110
OPUNC05G16800.2 Myb 116 162
OPUNC05G16800.2 Myb 168 213

Links

Other Myb/SANT family TFs
Other Oryza punctata TFs

Invalid Input OrderBy

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action