CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC05G16800
(
Oryza punctata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OPUNC05G16800
T276515_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.703
0.818
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.678
0.773
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.694
0.750
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.694
0.750
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.690
0.771
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC05G16800.1
Myb
64
102
KGGWTPEEDEKLRKAVDIYNGKNWKKIEVQCLHRWQKVL
OPUNC05G16800.1
Myb
108
154
KGPWTQQEDDVIINLVKKHGPKKWSVIARSLNGRIGKQCRERWHNHL
OPUNC05G16800.1
Myb
160
205
KEAWTVEEEHVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSL
OPUNC05G16800.2
Myb
64
110
KGGWTPEEDEKLRKAVDIYNGKNWKKIAESFSDRTEVQCLHRWQKVL
OPUNC05G16800.2
Myb
116
162
KGPWTQQEDDVIINLVKKHGPKKWSVIARSLNGRIGKQCRERWHNHL
OPUNC05G16800.2
Myb
168
213
KEAWTVEEEHVLARAHCMYGNKWAEIAKLLPGRTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Oryza punctata
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy