OPUNC06G00590 (Oryza punctata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OPUNC06G00590 T276525_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.724 0.785
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.723 0.753
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.723 0.753
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.723 0.774
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.723 0.774
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.703 0.774
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.703 0.774
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.686 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC06G00590.1 Myb 15 62
OPUNC06G00590.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza punctata TFs

486 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava6733.valid.m1 Manihot esculenta cassava6733.valid.m1 N 0.000
gene24036-v1.0-hybrid Fragaria vesca gene24036-v1.0-hybrid N 0.000
GLYMA05G20460 Glycine max GLYMA05G20460 N 0.000
Gorai.003G023500 Gossypium raimondii Gorai.003G023500 N 0.000
MDP0000254208 Malus domestica MDP0000254208 N 0.000
Pm026366 Prunus mume Pm026366 N 0.000
PRUPE_ppa009274mg Prunus persica PRUPE_ppa009274mg N 0.000
TCM_000610 Theobroma cacao TCM_000610 N 0.000