OPUNC09G03970 (Oryza punctata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OPUNC09G03970 T276580_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.857 0.915
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.857 0.915
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.857 0.915
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.857 0.915
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.784 0.809
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.772 0.809
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.772 0.809
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.772 0.809
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.772 0.809
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.735 0.787
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.735 0.787
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.725 0.745
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.719 0.723
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.719 0.723
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.719 0.723
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.712 0.787
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.712 0.787
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.712 0.787
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB

VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.704 0.787
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD

HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.704 0.787
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.703 0.830
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.690 0.745
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.690 0.745
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.688 0.745
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.688 0.745
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.685 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC09G03970.1 Myb 25 76
OPUNC09G03970.2 Myb 25 76
OPUNC09G03970.3 Myb 25 76

Links

Other Myb/SANT family TFs
Other Oryza punctata TFs

945 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D 0.000
BGIOSGA019930 Oryza indica BGIOSGA019930 I 0.000
ONIVA05G18780 Oryza nivara ONIVA05G18780 I 0.000
OPUNC01G37310 Oryza punctata OPUNC01G37310 I 0.000
OPUNC05G15820 Oryza punctata OPUNC05G15820 I 0.000
ORGLA01G0323500 Oryza glaberrima ORGLA01G0323500 I 0.000
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I 0.000
ORUFI01G41890 Oryza rufipogon ORUFI01G41890 I 0.000
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I 0.000
OS01G0867300 Oryza sativa OS01G0867300 I 0.000
OS05G0437700 Oryza sativa OS05G0437700 I 0.000
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I 0.000
TRAES3BF019000220CFD_g Triticum aestivum TRAES3BF019000220CFD_g I 0.000
TRIUR3_19588 Triticum urartu TRIUR3_19588 I 0.000
cassava12750.valid.m1 Manihot esculenta cassava12750.valid.m1 I 0.000
ONIVA01G43200 Oryza nivara ONIVA01G43200 I 0.000
OMERI05G15500 Oryza meridionalis OMERI05G15500 I 0.000
OMERI01G35430 Oryza meridionalis OMERI01G35430 I 0.000
BRADI2G24120 Brachypodium distachyon BRADI2G24120 I 0.000
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I 0.000
F775_25077 Aegilops tauschii F775_25077 I 0.000
LPERR01G33060 Leersia perrieri LPERR01G33060 I 0.000
LPERR05G14180 Leersia perrieri LPERR05G14180 I 0.000
MLOC_53321 Hordeum vulgare MLOC_53321 I 0.000
MLOC_64571 Hordeum vulgare MLOC_64571 I 0.000
OB05G25740 Oryza brachyantha OB05G25740 I 0.000
OBART01G38510 Oryza barthii OBART01G38510 I 0.000
OBART05G17920 Oryza barthii OBART05G17920 I 0.000
OGLUM01G42750 Oryza glumaepatula OGLUM01G42750 I 0.000
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I 0.000
OLONG_006755 Oryza longistaminata OLONG_006755 I 0.000
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.000