CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC09G09680
(
Oryza punctata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OPUNC09G09680
T276583_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.747
0.796
RAX3
M11043_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.747
0.796
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC09G09680.1
Myb
14
54
KGPWAPEEDAALKAYVDAHGTGGNWIALPHKIVHAEMGRAP
OPUNC09G09680.1
Myb
63
111
KGPWAPEEDAALKAYVDAHGTGGNWIALPHKIGLNRCGKSCRLRWLNYL
OPUNC09G09680.1
Myb
117
162
HGGFTEEEDRLICSLYIAIGSRWATIAAQLPGRTDNDIKNYWNSKL
OPUNC09G09680.2
Myb
14
62
KGPWAPEEDAALKAYVDAHGTGGNWIALPHKIGLNRCGKSCRLRWLNYL
OPUNC09G09680.2
Myb
68
113
HGGFTEEEDRLICSLYIAIGSRWATIAAQLPGRTDNDIKNYWNSKL
Links
Other
Myb/SANT
family TFs
Other
Oryza punctata
TFs
443 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy