OPUNC12G16890 (Oryza punctata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OPUNC12G16890 T276608_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG

CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.803 0.851
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00
Ostreococcus tauri
NRMCCTANN

NNTAGGKYN
PBM
Weirauch et al.(2014)
pTH9424
0.702 0.660
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR

YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.693 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC12G16890.1 Myb 5 57
OPUNC12G16890.2 Myb 5 57
OPUNC12G16890.3 Myb 5 57

Links

Other Myb/SANT family TFs
Other Oryza punctata TFs

Invalid Input OrderBy

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action