CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA01G0040700
(
Oryza glaberrima
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ORGLA01G0040700
T276615_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.668
0.742
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.668
0.742
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA01G0040700.1
Myb
24
71
KGLWSPEEDERLATHIARFGVSCWSSVPDLAGLQRCGKSCRLRWMNYL
ORGLA01G0040700.1
Myb
77
122
RGRFSHHEEELILALHDKLGNSWSQIAARLPGRSDNEIKNFWNARL
Links
Other
Myb/SANT
family TFs
Other
Oryza glaberrima
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy