ORGLA03G0138900 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA03G0138900 T276687_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06182.1
M02349_2.00 		Cannabis sativa
WTACCTACCN
NGGTAGGTAW		 PBM
Weirauch et al.(2014)
pTH9581 		0.734 0.851
MYB111
M00882_2.00 		Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB111 		0.690 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0138900.1 Myb 14 61
ORGLA03G0138900.1 Myb 67 138

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.909
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.861
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.861
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.861
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.861
OBART03G14380 Oryza barthii OBART03G14380 I 0.861
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.802
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.802
Si039538m.g Setaria italica Si039538m.g I 0.802
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.802
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.766
F775_11235 Aegilops tauschii F775_11235 I 0.766
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.766
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.766
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.763
OB03G24320 Oryza brachyantha OB03G24320 I 0.755
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.753
Cla009418 Citrullus lanatus Cla009418 I 0.753
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.749
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.744
TCM_004777 Theobroma cacao TCM_004777 I 0.742
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.739
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.739
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.736
PK06182.1 Cannabis sativa PK06182.1 D 0.734
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.734
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.733
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.732
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.730
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.726
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.725
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.724
Bo3g039690 Brassica oleracea Bo3g039690 I 0.723
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.722
Si002107m.g Setaria italica Si002107m.g I 0.721
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.721
Cla017646 Citrullus lanatus Cla017646 I 0.720
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.720
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.720
OS01G0305900 Oryza sativa OS01G0305900 I 0.717
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.717
ORGLA01G0099200 Oryza glaberrima ORGLA01G0099200 I 0.717
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.717
ONIVA01G15380 Oryza nivara ONIVA01G15380 I 0.717
OBART01G11800 Oryza barthii OBART01G11800 I 0.717
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.717
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.717
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.714
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.714
Bra000453 Brassica rapa Bra000453 I 0.714
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.713
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.712
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.712
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.712
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.712
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.712
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.712
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.711
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.711
MYB12 Arabidopsis thaliana AT2G47460 I 0.710
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.710
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.709
OB01G22640 Oryza brachyantha OB01G22640 I 0.704
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.703
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.703
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.703
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.703
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.703
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.700
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.699
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.699
Bra036145 Brassica rapa Bra036145 I 0.699
Cla022107 Citrullus lanatus Cla022107 I 0.699
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.698
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.698
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.698
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.698
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.695
MDP0000119725 Malus domestica MDP0000119725 I 0.695
MDP0000607330 Malus domestica MDP0000607330 I 0.695
Ca_03498 Cicer arietinum Ca_03498 I 0.691
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.691
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.691
Bo7g092680 Brassica oleracea Bo7g092680 I 0.690
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.690
MYB111 Arabidopsis thaliana AT5G49330 D 0.690
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.690
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.690
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.690
Bra037419 Brassica rapa Bra037419 I 0.690
TCM_021317 Theobroma cacao TCM_021317 I 0.689
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.688
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.688
MYB11 Arabidopsis thaliana AT3G62610 I 0.687
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.686
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.686
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.685
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.683
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.683
Pm008294 Prunus mume Pm008294 I 0.683
Bo4g004500 Brassica oleracea Bo4g004500 I 0.682
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.682
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.679
PK16958.1 Cannabis sativa PK16958.1 I 0.679
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.679
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.679
Pm020104 Prunus mume Pm020104 I 0.679
mgf012733m Mimulus guttatus mgf012733m I 0.679
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.679
mgf003233m Mimulus guttatus mgf003233m I 0.678
Pm025102 Prunus mume Pm025102 I 0.677
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.677
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.674
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.674
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.674
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.672
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.672
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.672
MDP0000209761 Malus domestica MDP0000209761 I 0.672
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.672
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.672
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.671
TCM_021318 Theobroma cacao TCM_021318 I 0.670
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.670
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.665
mgf024278m Mimulus guttatus mgf024278m I 0.663
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.663
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.663
LPERR08G15530 Leersia perrieri LPERR08G15530 I 0.662
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.662
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.662
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.661
Pm029185 Prunus mume Pm029185 I 0.661