ORGLA11G0142700 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA11G0142700 T276830_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.845 0.946
ATY13
M07035_2.00
Arabidopsis thaliana
HAMCHMCCAMCHAHH

DDTDGKTGGKDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_col_a
0.841 0.925
ATY13
M07036_2.00
Arabidopsis thaliana
HAMCHHCCAACHAHH

DDTDGTTGGDDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_colamp_a
0.841 0.925
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.808 0.892
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.808 0.892
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.793 0.892
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.793 0.892
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.793 0.892
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.793 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA11G0142700.1 Myb 15 62
ORGLA11G0142700.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC025 Arabidopsis thaliana AT1G61110 D 0.000
29950.m001173 Ricinus communis 29950.m001173 I 0.000
Cagra.2213s0001 Capsella grandiflora Cagra.2213s0001 I 0.000
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.000
Carubv10021371m.g Capsella rubella Carubv10021371m.g I 0.000
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.000
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.000
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.000
Eucgr.A02070 Eucalyptus grandis Eucgr.A02070 I 0.000
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.000
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.000
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.000
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.000
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.000
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.000
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.000
Bostr.10040s0089 Boechera stricta Bostr.10040s0089 I 0.000
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.000
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.000
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.000
cassava3577.m1 Manihot esculenta cassava3577.m1 I 0.000
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.000
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.000
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.000
Cucsa.341790 Cucumis sativus Cucsa.341790 I 0.000
mgf007362m Mimulus guttatus mgf007362m I 0.000
mgf016382m Mimulus guttatus mgf016382m I 0.000
Aquca_024_00081 Aquilegia coerulea Aquca_024_00081 I 0.000
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.000
Aquca_059_00027 Aquilegia coerulea Aquca_059_00027 I 0.000
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.000
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.000
SapurV1A.0127s0010 Salix purpurea SapurV1A.0127s0010 I 0.000
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.000
SapurV1A.0746s0010 Salix purpurea SapurV1A.0746s0010 I 0.000
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.000
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.000
SapurV1A.2174s0010 Salix purpurea SapurV1A.2174s0010 I 0.000
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.000
Thhalv10023591m.g Eutrema salsugineum Thhalv10023591m.g I 0.000
PK08629.1 Cannabis sativa PK08629.1 I 0.000
PK19059.1 Cannabis sativa PK19059.1 I 0.000
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.000
chr2.CM0641.320.nc Lotus japonicus chr2.CM0641.320.nc I 0.000
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.000
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.000
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.000
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.000
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.000
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.000
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.000
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.000
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.000
MDP0000173636 Malus domestica MDP0000173636 I 0.000
MDP0000180683 Malus domestica MDP0000180683 I 0.000
MDP0000868419 Malus domestica MDP0000868419 I 0.000
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.000
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.000
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.000
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.000
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.000
29851.m002359 Ricinus communis 29851.m002359 I 0.000
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.000
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.000
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.000
GSMUA_Achr10G12860_001 Musa acuminata GSMUA_Achr10G12860_001 I 0.000
LPERR07G16320 Leersia perrieri LPERR07G16320 I 0.000
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.000
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.000
OB07G24770 Oryza brachyantha OB07G24770 I 0.000
OLONG_002265 Oryza longistaminata OLONG_002265 I 0.000
OMERI07G15720 Oryza meridionalis OMERI07G15720 I 0.000
OPUNC07G17890 Oryza punctata OPUNC07G17890 I 0.000
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.000
PGSC0003DMG400025031 Solanum tuberosum PGSC0003DMG400025031 I 0.000
GLYMA16G26740 Glycine max GLYMA16G26740 I 0.000
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.000
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.000
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.000
NAC056 Arabidopsis thaliana AT3G15510 I 0.000
Bo01282s010 Brassica oleracea Bo01282s010 I 0.000
Bo3g066880 Brassica oleracea Bo3g066880 I 0.000
Bo5g127030 Brassica oleracea Bo5g127030 I 0.000
Bra001597 Brassica rapa Bra001597 I 0.000
Bra027101 Brassica rapa Bra027101 I 0.000
Bra027237 Brassica rapa Bra027237 I 0.000
anac025 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000277 I 0.000
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.000
GLYMA02G07700 Glycine max GLYMA02G07700 I 0.000
GLYMA12G34990 Glycine max GLYMA12G34990 I 0.000
POPTR_0001s41490 Populus trichocarpa POPTR_0001s41490 I 0.000
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.000
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.000
TCM_031363 Theobroma cacao TCM_031363 I 0.000
TCM_041055 Theobroma cacao TCM_041055 I 0.000
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I 0.000
anac047 Vitis vinifera VIT_08s0007g07670 I 0.000
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.000
Ca_06901 Cicer arietinum Ca_06901 I 0.000
Ca_19654 Cicer arietinum Ca_19654 I 0.000
Cla011948 Citrullus lanatus Cla011948 I 0.000
Cla023771 Citrullus lanatus Cla023771 I 0.000
Pm009955 Prunus mume Pm009955 I 0.000
Pm011604 Prunus mume Pm011604 I 0.000
Pm025312 Prunus mume Pm025312 I 0.000
TCM_029931 Theobroma cacao TCM_029931 I 0.000
TCM_026030 Theobroma cacao TCM_026030 I 0.000
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.000
POPTR_0011s12420 Populus trichocarpa POPTR_0011s12420 I 0.000
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.000
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.000
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.000
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.000
PRUPE_ppa007445mg Prunus persica PRUPE_ppa007445mg I 0.000
27961.m000091 Ricinus communis 27961.m000091 I 0.000
Si032676m.g Setaria italica Si032676m.g I 0.000
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.000
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.000
Pm030099 Prunus mume Pm030099 N 0.000
PRUPE_ppa015363mg Prunus persica PRUPE_ppa015363mg N 0.000
PK06287.1 Cannabis sativa PK06287.1 N 0.000
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.000
MTR_7g085220 Medicago truncatula MTR_7g085220 N 0.000
Ca_08257 Cicer arietinum Ca_08257 N 0.000