ORUFI09G18880 (Oryza rufipogon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORUFI09G18880 T277056_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB43
M07127_2.00 		Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB43_col_a 		0.726 0.841
PK21166.1
M01281_2.00 		Cannabis sativa
HACCWAMY
RKTWGGTD		 PBM
Lambert et al.(2019)
pTH11255 		0.715 0.890
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI09G18880.1 Myb 46 82
ORUFI09G18880.1 Myb 88 133
ORUFI09G18880.3 Myb 3 36
ORUFI09G18880.3 Myb 42 87

Links

Other Myb/SANT family TFs
Other Oryza rufipogon TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000878601 Angiostrongylus costaricensis ACOC_0000878601 I 0.000
ANCCEY_11797 Ancylostoma ceylanicum ANCCEY_11797 I 0.000
ASIM_0001248901 Anisakis simplex ASIM_0001248901 I 0.000
ASU_04764 Ascaris suum ASU_04764 I 0.000
BXY_0004500 Bursaphelenchus xylophilus BXY_0004500 I 0.000
CBG18895 Caenorhabditis briggsae CBG18895 N 0.000
CJA06642 Caenorhabditis japonica CJA06642 N 0.000
CRE30862 Caenorhabditis remanei CRE30862 N 0.000
dmd-7 Caenorhabditis elegans WBGene00019521 N 0.000
EVEC_0001300201 Enterobius vermicularis EVEC_0001300201 I 0.000
GPLIN_000574100 Globodera pallida GPLIN_000574100 N 0.000
Hba_20459 Heterorhabditis bacteriophora Hba_20459 I 0.000
HCOI00602900 Haemonchus contortus HCOI00602900 I 0.000
HCOI01956800 Haemonchus contortus HCOI01956800 I 0.000
L596_g25360 Steinernema carpocapsae L596_g25360 I 0.000
L889_g19153 Steinernema feltiae L889_g19153 I 0.000
L892_g27590 Steinernema scapterisci L892_g27590 I 0.000
L893_g6833 Steinernema glaseri L893_g6833 I 0.000
L898_g6334 Steinernema monticolum L898_g6334 I 0.000
MhA1_Contig1400.frz3.gene1 Meloidogyne hapla MhA1_Contig1400.frz3.gene1 N 0.000
NBR_0000982201 Nippostrongylus brasiliensis NBR_0000982201 I 0.000
nDi.2.2.2.g06479 Dirofilaria immitis nDi.2.2.2.g06479 N 0.000
NECAME_08769 Necator americanus NECAME_08769 I 0.000
OESDEN_12332 Oesophagostomum dentatum OESDEN_12332 I 0.000
OFLC_0001397801 Onchocerca flexuosa OFLC_0001397801 N 0.000
PPA11400 Pristionchus pacificus PPA11400 I 0.000
RSKR_0000795800 Rhabditophanes kr3021 RSKR_0000795800 N 0.000
scaffold54-EXSNAP2012.9 Pristionchus exspectatus scaffold54-EXSNAP2012.9 I 0.000
SMUV_0001084001 Syphacia muris SMUV_0001084001 I 0.000
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf16852-processed-gene-0.2 N 0.000
SPAL_0001661800 Strongyloides papillosus SPAL_0001661800 N 0.000
SSTP_0000497600 Strongyloides stercoralis SSTP_0000497600 N 0.000
SVE_0126800 Strongyloides venezuelensis SVE_0126800 N 0.000
WBGene00240965 Onchocerca volvulus WBGene00240965 N 0.000
WUBG_01942 Wuchereria bancrofti WUBG_01942 N 0.000