CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORUFI09G18880
(
Oryza rufipogon
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
ORUFI09G18880
T277056_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.726
0.841
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY
RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.715
0.890
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI09G18880.1
Myb
46
82
LMSFILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNYL
ORUFI09G18880.1
Myb
88
133
RGLLTDAEEQLVIDLHAKLGNRWSKIAAKLPGRTDNEIKNHWNTHI
ORUFI09G18880.3
Myb
3
36
FILTNGHCCWRAVPKLAGLLRCGKSCRLRWTNYL
ORUFI09G18880.3
Myb
42
87
RGLLTDAEEQLVIDLHAKLGNRWSKIAAKLPGRTDNEIKNHWNTHI
Links
Other
Myb/SANT
family TFs
Other
Oryza rufipogon
TFs
222 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000878601
Angiostrongylus costaricensis
ACOC_0000878601
I
0.000
ANCCEY_11797
Ancylostoma ceylanicum
ANCCEY_11797
I
0.000
ASIM_0001248901
Anisakis simplex
ASIM_0001248901
I
0.000
ASU_04764
Ascaris suum
ASU_04764
I
0.000
BXY_0004500
Bursaphelenchus xylophilus
BXY_0004500
I
0.000
CBG18895
Caenorhabditis briggsae
CBG18895
N
0.000
CJA06642
Caenorhabditis japonica
CJA06642
N
0.000
CRE30862
Caenorhabditis remanei
CRE30862
N
0.000
dmd-7
Caenorhabditis elegans
WBGene00019521
N
0.000
EVEC_0001300201
Enterobius vermicularis
EVEC_0001300201
I
0.000
GPLIN_000574100
Globodera pallida
GPLIN_000574100
N
0.000
Hba_20459
Heterorhabditis bacteriophora
Hba_20459
I
0.000
HCOI00602900
Haemonchus contortus
HCOI00602900
I
0.000
HCOI01956800
Haemonchus contortus
HCOI01956800
I
0.000
L596_g25360
Steinernema carpocapsae
L596_g25360
I
0.000
L889_g19153
Steinernema feltiae
L889_g19153
I
0.000
L892_g27590
Steinernema scapterisci
L892_g27590
I
0.000
L893_g6833
Steinernema glaseri
L893_g6833
I
0.000
L898_g6334
Steinernema monticolum
L898_g6334
I
0.000
MhA1_Contig1400.frz3.gene1
Meloidogyne hapla
MhA1_Contig1400.frz3.gene1
N
0.000
NBR_0000982201
Nippostrongylus brasiliensis
NBR_0000982201
I
0.000
nDi.2.2.2.g06479
Dirofilaria immitis
nDi.2.2.2.g06479
N
0.000
NECAME_08769
Necator americanus
NECAME_08769
I
0.000
OESDEN_12332
Oesophagostomum dentatum
OESDEN_12332
I
0.000
OFLC_0001397801
Onchocerca flexuosa
OFLC_0001397801
N
0.000
PPA11400
Pristionchus pacificus
PPA11400
I
0.000
RSKR_0000795800
Rhabditophanes kr3021
RSKR_0000795800
N
0.000
scaffold54-EXSNAP2012.9
Pristionchus exspectatus
scaffold54-EXSNAP2012.9
I
0.000
SMUV_0001084001
Syphacia muris
SMUV_0001084001
I
0.000
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf16852-processed-gene-0.2
N
0.000
SPAL_0001661800
Strongyloides papillosus
SPAL_0001661800
N
0.000
SSTP_0000497600
Strongyloides stercoralis
SSTP_0000497600
N
0.000
SVE_0126800
Strongyloides venezuelensis
SVE_0126800
N
0.000
WBGene00240965
Onchocerca volvulus
WBGene00240965
N
0.000
WUBG_01942
Wuchereria bancrofti
WUBG_01942
N
0.000