OS01G0298400 (Oryza sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OS01G0298400 T277100_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.748 0.796
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.736 0.785
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.736 0.785
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.691 0.731
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.691 0.731
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.674 0.634
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.665 0.742
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.662 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0298400-01 Myb 23 70
OS01T0298400-01 Myb 76 121

Links

Other Myb/SANT family TFs
Other Oryza sativa TFs

560 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF038 Arabidopsis thaliana AT2G35700 D 0.000
Q3HS42_BRANA Brassica napus Q3HS42_BRANA D 0.000
Q3HS43_BRANA Brassica napus Q3HS43_BRANA D 0.000
Q3HS44_BRANA Brassica napus Q3HS44_BRANA D 0.000
Q5MAR7_BRANA Brassica napus Q5MAR7_BRANA D 0.000
ERF039 Arabidopsis thaliana AT4G16750 D 0.000
Bostr.30275s0134 Boechera stricta Bostr.30275s0134 I 0.000
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I 0.000
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I 0.000
Ciclev10024602m.g Citrus clementina Ciclev10024602m.g I 0.000
Carubv10024111m.g Capsella rubella Carubv10024111m.g I 0.000
Carubv10005867m.g Capsella rubella Carubv10005867m.g I 0.000
Cagra.0993s0081 Capsella grandiflora Cagra.0993s0081 I 0.000
Bostr.23794s0528 Boechera stricta Bostr.23794s0528 I 0.000
Gorai.004G196700 Gossypium raimondii Gorai.004G196700 I 0.000
Gorai.007G028800 Gossypium raimondii Gorai.007G028800 I 0.000
Lus10004738.g Linum usitatissimum Lus10004738.g I 0.000
LjT37H17.40.nd Lotus japonicus LjT37H17.40.nd I 0.000
LjT33K05.50.nd Lotus japonicus LjT33K05.50.nd I 0.000
PK25970.1 Cannabis sativa PK25970.1 I 0.000
Thhalv10026276m.g Eutrema salsugineum Thhalv10026276m.g I 0.000
Thhalv10017258m.g Eutrema salsugineum Thhalv10017258m.g I 0.000
SapurV1A.0272s0090 Salix purpurea SapurV1A.0272s0090 I 0.000
orange1.1g023148m.g Citrus sinensis orange1.1g023148m.g I 0.000
Lus10007799.g Linum usitatissimum Lus10007799.g I 0.000
Cucsa.321050 Cucumis sativus Cucsa.321050 I 0.000
cassava4979.m1 Manihot esculenta cassava4979.m1 I 0.000
ATERF38 Arabidopsis lyrata fgenesh2_kg.4__1597__AT2G35700.1 I 0.000
Bra040092 Brassica rapa Bra040092 I 0.000
Bra023026 Brassica rapa Bra023026 I 0.000
Bra017302 Brassica rapa Bra017302 I 0.000
Bra012693 Brassica rapa Bra012693 I 0.000
Bra005314 Brassica rapa Bra005314 I 0.000
Bo7g104770 Brassica oleracea Bo7g104770 I 0.000
Bo4g036220 Brassica oleracea Bo4g036220 I 0.000
Bo3g028500 Brassica oleracea Bo3g028500 I 0.000
fgenesh2_kg.7__2633__AT4G16750.1 Arabidopsis lyrata fgenesh2_kg.7__2633__AT4G16750.1 I 0.000
GLYMA05G04920 Glycine max GLYMA05G04920 I 0.000
GLYMA17G15310 Glycine max GLYMA17G15310 I 0.000
28353.m000054 Ricinus communis 28353.m000054 I 0.000
Pm023417 Prunus mume Pm023417 I 0.000
Cla005715 Citrullus lanatus Cla005715 I 0.000
Ca_12765 Cicer arietinum Ca_12765 I 0.000
TCM_015930 Theobroma cacao TCM_015930 I 0.000
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I 0.000
POPTR_0006s25500 Populus trichocarpa POPTR_0006s25500 I 0.000
POPTR_0003s07700 Populus trichocarpa POPTR_0003s07700 I 0.000
MTR_4g100650 Medicago truncatula MTR_4g100650 I 0.000
Bo1g053270 Brassica oleracea Bo1g053270 I 0.000
BRADI5G17630 Brachypodium distachyon BRADI5G17630 N 0.000