OS01G0874300 (Oryza sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OS01G0874300 T277122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.857 0.914
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.857 0.914
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.813 0.871
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.664 0.742
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.663 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS01T0874300-01 Myb 14 61
OS01T0874300-01 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza sativa TFs

559 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CGI_10026910 Crassostrea gigas CGI_10026910 N 0.000
NEMVEDRAFT_v1g95177 Nematostella vectensis NEMVEDRAFT_v1g95177 N 0.000
LotgiG97849 Lottia gigantea LotgiG97849 N 0.000
ENSXMAG00000013848 Xiphophorus maculatus ENSXMAG00000013848 N 0.000
ENSXMAG00000004642 Xiphophorus maculatus ENSXMAG00000004642 N 0.000
glis2b Takifugu rubripes ENSTRUG00000006205 N 0.000
ENSPFOG00000011330 Poecilia formosa ENSPFOG00000011330 N 0.000
ENSPFOG00000009286 Poecilia formosa ENSPFOG00000009286 N 0.000
glis2b Oryzias latipes ENSORLG00000008275 N 0.000
ENSLOCG00000002612 Lepisosteus oculatus ENSLOCG00000002612 N 0.000
ENSGMOG00000014914 Gadus morhua ENSGMOG00000014914 N 0.000
glis2b Gasterosteus aculeatus ENSGACG00000011323 N 0.000
glis2b Danio rerio ENSDARG00000100232 N 0.000
glis2a Danio rerio ENSDARG00000078388 N 0.000
ENSAMXG00000018801 Astyanax mexicanus ENSAMXG00000018801 N 0.000
glis2.S Xenopus laevis XB-GENE-6251812 N 0.000