OS09G0299200 (Oryza sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OS09G0299200 T277273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHL7
M02292_2.00
Arabidopsis thaliana
NWGATDCBNN

NNVGHATCWN
PBM
Weirauch et al.(2014)
pTH7253
0.857 0.915
PK10342.1
M02351_2.00
Cannabis sativa
WAGATKCS

SGMATCTW
PBM
Weirauch et al.(2014)
pTH9489
0.857 0.915
PHL7
M07040_2.00
Arabidopsis thaliana
DRNAKATTCBNHNNN

NNNDNVGAATMTNYH
Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a
0.857 0.915
PHL7
M07041_2.00
Arabidopsis thaliana
VGAATATTCBNHH

DDNVGAATATTCB
Dap-seq
OMalley et al.(2016)
At2g01060_col
0.857 0.915
Q5IWM2_WHEAT
M11059_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB80_01
0.784 0.809
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.772 0.809
UNE16
M01270_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Lambert et al.(2019)
pTH9967
0.772 0.809
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.772 0.809
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.772 0.809
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.735 0.787
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.735 0.787
MYR1
M02309_2.00
Arabidopsis thaliana
NKATNCBNNN

NNNVGNATMN
PBM
Weirauch et al.(2014)
pTH8859
0.725 0.745
MYR2
M02294_2.00
Arabidopsis thaliana
NKATDCBNN

NNVGHATMN
PBM
Weirauch et al.(2014)
pTH7097
0.719 0.723
MYR2
M07063_2.00
Arabidopsis thaliana
NNDAAKATTCYHHN

NDDRGAATMTTHNN
Dap-seq
OMalley et al.(2016)
At3g04030_col_a
0.719 0.723
MYR2
M07064_2.00
Arabidopsis thaliana
VRAAKATTCBHWNNN

NNNWDVGAATMTTYB
Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a
0.719 0.723
PHL12
M01077_2.00
Arabidopsis thaliana
NWKATTCBNN

NNVGAATMWN
PBM
Sullivan et al.(2014)
pTH7098
0.712 0.787
PHL12
M07079_2.00
Arabidopsis thaliana
RGAATATTCYYTWN

NWARRGAATATTCY
Dap-seq
OMalley et al.(2016)
At3g12730_col_a
0.712 0.787
PHL12
M07080_2.00
Arabidopsis thaliana
NNRAAKATTCBHHN

NDDVGAATMTTYNN
Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a
0.712 0.787
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB

VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.704 0.787
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD

HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.704 0.787
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.703 0.830
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.690 0.745
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.690 0.745
PHL11
M07134_2.00
Arabidopsis thaliana
NNRAAKATTCYHHN

NDDRGAATMTTYNN
Dap-seq
OMalley et al.(2016)
AT5G45580_col_a
0.688 0.745
PHL11
M07135_2.00
Arabidopsis thaliana
NRAAKATTCYHHNN

NNDDRGAATMTTYN
Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a
0.688 0.745
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.685 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS09T0299200-01 Myb 39 90

Links

Other Myb/SANT family TFs
Other Oryza sativa TFs

944 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_023_00033 Aquilegia coerulea Aquca_023_00033 N 0.000
Ca_04306 Cicer arietinum Ca_04306 N 0.000
Cla012103 Citrullus lanatus Cla012103 N 0.000
Ciclev10002467m.g Citrus clementina Ciclev10002467m.g N 0.000
orange1.1g028218m.g Citrus sinensis orange1.1g028218m.g N 0.000
Cucsa.088330 Cucumis sativus Cucsa.088330 N 0.000
gene29104-v1.0-hybrid Fragaria vesca gene29104-v1.0-hybrid N 0.000
Gorai.005G074700 Gossypium raimondii Gorai.005G074700 N 0.000
MLOC_10423 Hordeum vulgare MLOC_10423 N 0.000
chr5.LjT08L18.190.nd Lotus japonicus chr5.LjT08L18.190.nd N 0.000
cassava25358.m1 Manihot esculenta cassava25358.m1 N 0.000
MTR_1g096340 Medicago truncatula MTR_1g096340 N 0.000
mgf002286m Mimulus guttatus mgf002286m N 0.000
OBART03G40280 Oryza barthii OBART03G40280 N 0.000
ORGLA03G0371400 Oryza glaberrima ORGLA03G0371400 N 0.000
OGLUM03G40150 Oryza glumaepatula OGLUM03G40150 N 0.000
BGIOSGA009486 Oryza indica BGIOSGA009486 N 0.000
ONIVA03G42160 Oryza nivara ONIVA03G42160 N 0.000
OPUNC03G37470 Oryza punctata OPUNC03G37470 N 0.000
OPUNC03G37490 Oryza punctata OPUNC03G37490 N 0.000
ORUFI03G42080 Oryza rufipogon ORUFI03G42080 N 0.000
OS03G0838900 Oryza sativa OS03G0838900 N 0.000
Pavir.Ia00190 Panicum virgatum Pavir.Ia00190 N 0.000
Pavir.J01833 Panicum virgatum Pavir.J01833 N 0.000
POPTR_0013s11780 Populus trichocarpa POPTR_0013s11780 N 0.000
Pm022190 Prunus mume Pm022190 N 0.000
PRUPE_ppa026991mg Prunus persica PRUPE_ppa026991mg N 0.000
29728.m000821 Ricinus communis 29728.m000821 N 0.000
SapurV1A.0179s0060 Salix purpurea SapurV1A.0179s0060 N 0.000
PGSC0003DMG400009226 Solanum tuberosum PGSC0003DMG400009226 N 0.000
Sb01g001940 Sorghum bicolor Sb01g001940 N 0.000
TCM_036345 Theobroma cacao TCM_036345 N 0.000
VIT_18s0072g01130 Vitis vinifera VIT_18s0072g01130 N 0.000