OSTLU_5960 (Ostreococcus lucimarinus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OSTLU_5960 T277326_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT

AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.687 0.804
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN

NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.687 0.804
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW

WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.687 0.804
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN

NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.667 0.761
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ABO96757 Myb 29 74

Links

Other Myb/SANT family TFs
Other Ostreococcus lucimarinus TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw1.6.1363.1 Ostreococcus RCC809 gw1.6.1363.1 I 0.867
estExt_genewise1.C_Chr_06.00010302 Ostreococcus tauri estExt_genewise1.C_Chr_06.00010302 I 0.844
OLONG_003280 Oryza longistaminata OLONG_003280 I 0.772
OMERI02G27330 Oryza meridionalis OMERI02G27330 I 0.772
OGLUM02G28780 Oryza glumaepatula OGLUM02G28780 I 0.772
ORGLA02G0242600 Oryza glaberrima ORGLA02G0242600 I 0.772
ORUFI02G29720 Oryza rufipogon ORUFI02G29720 I 0.772
OBART02G28240 Oryza barthii OBART02G28240 I 0.772
ONIVA09G03730 Oryza nivara ONIVA09G03730 I 0.772
OS02G0685200 Oryza sativa OS02G0685200 I 0.772
BGIOSGA005828 Oryza indica BGIOSGA005828 I 0.772
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.740
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.740
OGLUM04G22920 Oryza glumaepatula OGLUM04G22920 I 0.738
OLONG_010266 Oryza longistaminata OLONG_010266 I 0.738
OBART04G23030 Oryza barthii OBART04G23030 I 0.738
OB04G29880 Oryza brachyantha OB04G29880 I 0.738
LPERR04G18770 Leersia perrieri LPERR04G18770 I 0.738
ORUFI04G24740 Oryza rufipogon ORUFI04G24740 I 0.738
OMERI04G19240 Oryza meridionalis OMERI04G19240 I 0.738
BGIOSGA014483 Oryza indica BGIOSGA014483 I 0.738
OS04G0583900 Oryza sativa OS04G0583900 I 0.738
OPUNC04G20560 Oryza punctata OPUNC04G20560 I 0.738
ONIVA04G22180 Oryza nivara ONIVA04G22180 I 0.738
Sb06g026500 Sorghum bicolor Sb06g026500 I 0.727
Pavir.J10427 Panicum virgatum Pavir.J10427 I 0.727
Si010077m.g Setaria italica Si010077m.g I 0.727
Pavir.Gb00859 Panicum virgatum Pavir.Gb00859 I 0.727
Ca_18030 Cicer arietinum Ca_18030 I 0.724
MTR_5g076960 Medicago truncatula MTR_5g076960 I 0.724
LPERR02G22990 Leersia perrieri LPERR02G22990 I 0.723
OPUNC02G25920 Oryza punctata OPUNC02G25920 I 0.723
OB02G35470 Oryza brachyantha OB02G35470 I 0.723
GRMZM2G181030 Zea mays GRMZM2G181030 I 0.717
MLOC_62877 Hordeum vulgare MLOC_62877 I 0.716
F775_27077 Aegilops tauschii F775_27077 I 0.716
BRADI5G19380 Brachypodium distachyon BRADI5G19380 I 0.716
Traes_2AL_660616C44 Triticum aestivum Traes_2AL_660616C44 I 0.716
Traes_2DL_31EED5C94 Triticum aestivum Traes_2DL_31EED5C94 I 0.716
Traes_2BL_3041037F1 Triticum aestivum Traes_2BL_3041037F1 I 0.716
Pavir.J00602 Panicum virgatum Pavir.J00602 I 0.708
MLOC_57684 Hordeum vulgare MLOC_57684 I 0.708
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.708
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I 0.708
LjSGA_026437.1 Lotus japonicus LjSGA_026437.1 I 0.702
Bra008563 Brassica rapa Bra008563 I 0.699
Thhalv10013821m.g Eutrema salsugineum Thhalv10013821m.g I 0.699
Bra023610 Brassica rapa Bra023610 I 0.699
Cagra.4849s0004 Capsella grandiflora Cagra.4849s0004 I 0.699
Bo2g013560 Brassica oleracea Bo2g013560 I 0.699
Carubv10001147m.g Capsella rubella Carubv10001147m.g I 0.699
GSMUA_Achr11G01420_001 Musa acuminata GSMUA_Achr11G01420_001 I 0.699
Bo9g161410 Brassica oleracea Bo9g161410 I 0.699
Lus10031322.g Linum usitatissimum Lus10031322.g I 0.698
Lus10031893.g Linum usitatissimum Lus10031893.g I 0.698
Bra039503 Brassica rapa Bra039503 I 0.696
Bo6g057640 Brassica oleracea Bo6g057640 I 0.696
Thhalv10028153m.g Eutrema salsugineum Thhalv10028153m.g I 0.696
Bostr.9638s0043 Boechera stricta Bostr.9638s0043 I 0.696
RVE2 Arabidopsis lyrata fgenesh2_kg.7__3122__AT5G37260.1 I 0.696
Carubv10005376m.g Capsella rubella Carubv10005376m.g I 0.696
RVE2 Arabidopsis thaliana AT5G37260 I 0.696
Cagra.25009s0002 Capsella grandiflora Cagra.25009s0002 I 0.696
Ca_14385 Cicer arietinum Ca_14385 I 0.693
GLYMA18G05050 Glycine max GLYMA18G05050 I 0.693
GLYMA11G33180 Glycine max GLYMA11G33180 I 0.693
evm.TU.supercontig_178.22 Carica papaya evm.TU.supercontig_178.22 I 0.693
GLYMA02G40800 Glycine max GLYMA02G40800 I 0.693
GLYMA14G39130 Glycine max GLYMA14G39130 I 0.693
SapurV1A.0202s0430 Salix purpurea SapurV1A.0202s0430 I 0.691
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.691
POPTR_0012s03530 Populus trichocarpa POPTR_0012s03530 I 0.691
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I 0.689
Si017289m.g Setaria italica Si017289m.g I 0.689
Lus10030184.g Linum usitatissimum Lus10030184.g I 0.689
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I 0.689
Lus10005134.g Linum usitatissimum Lus10005134.g I 0.689
Sb04g031590 Sorghum bicolor Sb04g031590 I 0.689
F775_18043 Aegilops tauschii F775_18043 I 0.689
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I 0.689
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.689
Bostr.2618s0066 Boechera stricta Bostr.2618s0066 I 0.687
RVE1 Arabidopsis thaliana AT5G17300 D 0.687
RVE1 Arabidopsis lyrata fgenesh2_kg.6__1729__AT5G17300.1 I 0.687
GLYMA09G29800 Glycine max GLYMA09G29800 I 0.684
gw1.1.364.1 Volvox carteri gw1.1.364.1 I 0.682
GLYMA16G34340 Glycine max GLYMA16G34340 I 0.682
PDK_20s1315421g001 Phoenix dactylifera PDK_20s1315421g001 I 0.681
Bo3g012470 Brassica oleracea Bo3g012470 I 0.681
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I 0.678
Thhalv10008035m.g Eutrema salsugineum Thhalv10008035m.g I 0.677
LPERR06G23620 Leersia perrieri LPERR06G23620 I 0.674
OB06G35920 Oryza brachyantha OB06G35920 I 0.674
OGLUM06G29530 Oryza glumaepatula OGLUM06G29530 I 0.674
gene09296-v1.0-hybrid Fragaria vesca gene09296-v1.0-hybrid I 0.674
Sb10g030960 Sorghum bicolor Sb10g030960 I 0.674
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.674
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.674
F775_23690 Aegilops tauschii F775_23690 I 0.674
CHLREDRAFT_123164 Chlamydomonas reinhardtii CHLREDRAFT_123164 I 0.674
PK28456.1 Cannabis sativa PK28456.1 I 0.674
Pavir.Db00044 Panicum virgatum Pavir.Db00044 I 0.674
OLONG_007470 Oryza longistaminata OLONG_007470 I 0.674
GRMZM2G145041 Zea mays GRMZM2G145041 I 0.674
MDP0000795432 Malus domestica MDP0000795432 I 0.674
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I 0.674
Gorai.008G293600 Gossypium raimondii Gorai.008G293600 I 0.674
OBART06G28140 Oryza barthii OBART06G28140 I 0.674
Traes_7DL_1D415A4CF Triticum aestivum Traes_7DL_1D415A4CF I 0.674
Si006457m.g Setaria italica Si006457m.g I 0.674
TRIUR3_01040 Triticum urartu TRIUR3_01040 I 0.674
PRUPE_ppa006715mg Prunus persica PRUPE_ppa006715mg I 0.674
BGIOSGA020501 Oryza indica BGIOSGA020501 I 0.674
Pm025253 Prunus mume Pm025253 I 0.674
OPUNC06G25680 Oryza punctata OPUNC06G25680 I 0.674
Traes_7BL_BA181D2AD Triticum aestivum Traes_7BL_BA181D2AD I 0.674
ORUFI06G30080 Oryza rufipogon ORUFI06G30080 I 0.674
OS06G0728700 Oryza sativa OS06G0728700 I 0.674
TCM_013400 Theobroma cacao TCM_013400 I 0.674
OMERI06G28070 Oryza meridionalis OMERI06G28070 I 0.674
ORGLA06G0287300 Oryza glaberrima ORGLA06G0287300 I 0.674
Traes_7AL_665B92F4E Triticum aestivum Traes_7AL_665B92F4E I 0.674
ONIVA06G31120 Oryza nivara ONIVA06G31120 I 0.674
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I 0.672
Pavir.Aa00960 Panicum virgatum Pavir.Aa00960 I 0.671
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I 0.670
GSMUA_Achr8G13440_001 Musa acuminata GSMUA_Achr8G13440_001 I 0.668
SELMODRAFT_29451 Selaginella moellendorffii SELMODRAFT_29451 I 0.668
SELMODRAFT_19475 Selaginella moellendorffii SELMODRAFT_19475 I 0.668
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I 0.668
e_gw1.96.88.1 Physcomitrella patens e_gw1.96.88.1 I 0.668
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I 0.668
PK08316.1 Cannabis sativa PK08316.1 D 0.667
Bra025914 Brassica rapa Bra025914 I 0.667
Bra006394 Brassica rapa Bra006394 I 0.667
Bo5g025310 Brassica oleracea Bo5g025310 I 0.667
MTR_6g477860 Medicago truncatula MTR_6g477860 I 0.666
Lus10042292.g Linum usitatissimum Lus10042292.g I 0.664
Cla018914 Citrullus lanatus Cla018914 I 0.664
Cucsa.112530 Cucumis sativus Cucsa.112530 I 0.664
Lus10026365.g Linum usitatissimum Lus10026365.g I 0.664
Cagra.0909s0012 Capsella grandiflora Cagra.0909s0012 I 0.662
Carubv10009624m.g Capsella rubella Carubv10009624m.g I 0.662
Bostr.7128s0434 Boechera stricta Bostr.7128s0434 I 0.662