PGSC0003DMG400001376 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400001376 T277518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.820 0.871
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.694 0.656
MYB27
M07097_2.00
Arabidopsis thaliana
HHTACCTAAYTTWWN

NWWAARTTAGGTADD
Dap-seq
OMalley et al.(2016)
MYB27_col_a
0.693 0.656
MYB27
M07098_2.00
Arabidopsis thaliana
NYHTACCTAAYTTWHN

NDWAARTTAGGTADRN
Dap-seq
OMalley et al.(2016)
MYB27_colamp_a
0.693 0.656
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.688 0.699
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.688 0.699
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN

NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400003479 Myb 19 66
PGSC0003DMT400003479 Myb 72 117

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

449 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000009576 Ailuropoda melanoleuca ENSAMEG00000009576 I 0.000
ENSCPOG00000011396 Cavia porcellus ENSCPOG00000011396 I 0.000
ENSCSAG00000000923 Chlorocebus sabaeus ENSCSAG00000000923 I 0.000
ENSMEUG00000013368 Macropus eugenii ENSMEUG00000013368 I 0.000
ENSMPUG00000015896 Mustela putorius furo ENSMPUG00000015896 I 0.000
ENSNLEG00000008477 Nomascus leucogenys ENSNLEG00000008477 I 0.000
ENSOARG00000007586 Ovis aries ENSOARG00000007586 I 0.000
ENSP00000324064-D75 Bos grunniens ENSP00000324064-D75 I 0.000
ENSPANG00000018160 Papio anubis ENSPANG00000018160 I 0.000
ENSPPYG00000001743 Pongo abelii ENSPPYG00000001743 I 0.000
ENSSSCG00000023614 Sus scrofa ENSSSCG00000023614 I 0.000
ENSSTOG00000001212 Ictidomys tridecemlineatus ENSSTOG00000001212 I 0.000
Myotis_brandtii_ZNF436_10029737 Myotis brandtii Myotis_brandtii_ZNF436_10029737 I 0.000
Zfp46 Mus musculus ENSMUSG00000051351 I 0.000
Zfp46 Dipodomys ordii ENSDORG00000007438 I 0.000
Zfp46 Rattus norvegicus ENSRNOG00000049975 I 0.000
ZNF436 Callithrix jacchus ENSCJAG00000005489 I 0.000
ZNF436 Pan troglodytes ENSPTRG00000000325 I 0.000
ZNF436 Pteropus vampyrus ENSPVAG00000014803 I 0.000
ZNF436 Sorex araneus ENSSARG00000012155 I 0.000
ZNF436 Choloepus hoffmanni ENSCHOG00000005098 I 0.000
ZNF436 Canis familiaris ENSCAFG00000031798 I 0.000
ZNF436 Tupaia belangeri ENSTBEG00000002827 I 0.000
ZNF436 Tursiops truncatus ENSTTRG00000007756 I 0.000
ZNF436 Vicugna pacos ENSVPAG00000006412 I 0.000
ZNF436 Bos taurus ENSBTAG00000002594 I 0.000
ZNF436 Procavia capensis ENSPCAG00000010535 I 0.000
ZNF436 Dasypus novemcinctus ENSDNOG00000015883 I 0.000
ZNF436 Homo sapiens ENSG00000125945 D 0.000
ZNF436 Microcebus murinus ENSMICG00000005876 I 0.000
ZNF436 Myotis lucifugus ENSMLUG00000007596 I 0.000
ZNF436 Macaca mulatta ENSMMUG00000010973 I 0.000
ZNF436 Monodelphis domestica ENSMODG00000016145 I 0.000
ZNF436 Felis catus ENSFCAG00000030008 I 0.000
ZNF436 Erinaceus europaeus ENSEEUG00000005276 I 0.000
ZNF436 Equus caballus ENSECAG00000011988 I 0.000
ZNF436 Oryctolagus cuniculus ENSOCUG00000010670 I 0.000
ZNF436 Otolemur garnettii ENSOGAG00000009181 I 0.000
ZNF436 Ochotona princeps ENSOPRG00000012417 I 0.000
ZNF436 Loxodonta africana ENSLAFG00000012795 I 0.000