CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400007304
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400007304
T277558_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.835
0.871
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.787
0.871
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400018840
Myb
26
54
HKMTEMIKEIQQRLLRCGKSCRLRWINYL
PGSC0003DMT400018840
Myb
60
105
RGNITSDEEAIIIKLRATLGNRWSLIVEHLPGRTDNEIKNYWNSHL
PGSC0003DMT400018841
Myb
14
61
RGRWTSEEDEIITNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL
PGSC0003DMT400018841
Myb
67
112
RGNITSDEEAIIIKLRATLGNRWSLIVEHLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy