PGSC0003DMG400007994 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400007994 T277564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.740 0.763
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.707 0.710
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.675 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400020635 Myb 35 81
PGSC0003DMT400020635 Myb 87 132

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.909
mgf006151m Mimulus guttatus mgf006151m I 0.883
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.841
Cla022889 Citrullus lanatus Cla022889 I 0.841
TCM_033907 Theobroma cacao TCM_033907 I 0.837
PK29071.1 Cannabis sativa PK29071.1 I 0.824
mgf003084m Mimulus guttatus mgf003084m I 0.820
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.804
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.797
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.797
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.796
MTR_3g101290 Medicago truncatula MTR_3g101290 I 0.791
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.788
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.788
30170.m013927 Ricinus communis 30170.m013927 I 0.788
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.788
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.787
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.780
Cla021015 Citrullus lanatus Cla021015 I 0.780
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.775
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.771
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.768
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.768
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.767
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.766
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.764
Ca_01522 Cicer arietinum Ca_01522 I 0.764
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.758
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.758
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.758
Si017917m.g Setaria italica Si017917m.g I 0.758
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.758
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.758
MDP0000894463 Malus domestica MDP0000894463 I 0.755
Pm005220 Prunus mume Pm005220 I 0.755
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.755
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.747
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.742
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.742
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.742
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.742
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.741
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.740
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.740
OS02G0187700 Oryza sativa OS02G0187700 D 0.740
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.740
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.740
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.740
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.740
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.740
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.739
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.739
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.738
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.730
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.730
MDP0000823270 Malus domestica MDP0000823270 I 0.729
MDP0000784297 Malus domestica MDP0000784297 I 0.729
MDP0000480596 Malus domestica MDP0000480596 I 0.729
MDP0000477900 Malus domestica MDP0000477900 I 0.729
MDP0000641708 Malus domestica MDP0000641708 I 0.729
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.727
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.726
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.726
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.726
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.726
OS09G0106700 Oryza sativa OS09G0106700 I 0.726
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.726
OBART09G00310 Oryza barthii OBART09G00310 I 0.726
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.726
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.726
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.726
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.726
OB09G10200 Oryza brachyantha OB09G10200 I 0.726
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.726
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.726
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.726
29801.m003096 Ricinus communis 29801.m003096 I 0.725
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.722
Si032789m.g Setaria italica Si032789m.g I 0.721
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.721
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.721
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.721
MDP0000187872 Malus domestica MDP0000187872 I 0.720
mgf025567m Mimulus guttatus mgf025567m I 0.720
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.717
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.716
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.716
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.716
Pm021211 Prunus mume Pm021211 I 0.711
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I 0.711
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I 0.709
MYB1 Arabidopsis thaliana AT3G09230 D 0.707
GLYMA17G36370 Glycine max GLYMA17G36370 I 0.705
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.705
PK16550.1 Cannabis sativa PK16550.1 I 0.705
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.705
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.704
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.704
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.704
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.704
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.704
Si006938m.g Setaria italica Si006938m.g I 0.704
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.703
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.703
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.703
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.700
27798.m000612 Ricinus communis 27798.m000612 I 0.700
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.700
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.700
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.700
Pm002576 Prunus mume Pm002576 I 0.700
TCM_021796 Theobroma cacao TCM_021796 I 0.700
Cla018417 Citrullus lanatus Cla018417 I 0.700
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.700
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.700
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.699
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.699
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.697
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.697
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.695
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.695
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.693
mgf002573m Mimulus guttatus mgf002573m I 0.693
mgf023922m Mimulus guttatus mgf023922m I 0.692
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.692
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.691
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.691
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.688
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.688
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.688
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.687
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.687
Cla022947 Citrullus lanatus Cla022947 I 0.685
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.685
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.685
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.685
TCM_007138 Theobroma cacao TCM_007138 I 0.682
mgf018580m Mimulus guttatus mgf018580m I 0.681
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.680
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.680
PK12959.1 Cannabis sativa PK12959.1 I 0.680
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.680
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.680
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.680
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.680
MLOC_63964 Hordeum vulgare MLOC_63964 I 0.679
TRIUR3_25447 Triticum urartu TRIUR3_25447 I 0.679
mgf015566m Mimulus guttatus mgf015566m I 0.679
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.678
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.678
MDP0000478512 Malus domestica MDP0000478512 I 0.678
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.678
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.678
Cla013306 Citrullus lanatus Cla013306 I 0.677
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.676
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.676
Cla014191 Citrullus lanatus Cla014191 I 0.675
PK07741.1 Cannabis sativa PK07741.1 D 0.675
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.675
MDP0000203733 Malus domestica MDP0000203733 I 0.675
MDP0000319124 Malus domestica MDP0000319124 I 0.675
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.674
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.673
Bo3g062160 Brassica oleracea Bo3g062160 I 0.672
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.672
TCM_042629 Theobroma cacao TCM_042629 I 0.671
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.671
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.671
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.671
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.671
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.671
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.670
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.670
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.670
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.670
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.670
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.669
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.669
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.669
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.669
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I 0.668
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.668
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.668
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.667
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I 0.666
Cucsa.244650 Cucumis sativus Cucsa.244650 I 0.666
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I 0.665
Pm018862 Prunus mume Pm018862 I 0.665
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I 0.665
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I 0.665
Carubv10019440m.g Capsella rubella Carubv10019440m.g I 0.665
Bo8g079430 Brassica oleracea Bo8g079430 I 0.665
MDP0000284922 Malus domestica MDP0000284922 I 0.664
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.664
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.663
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.663
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I 0.663
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.663
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.663
OS06G0637500 Oryza sativa OS06G0637500 I 0.663
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.663
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.663
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.662
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.662
mgf014089m Mimulus guttatus mgf014089m I 0.662
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.662
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.661