PGSC0003DMG400008687 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400008687 T277572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB80
M07142_2.00
Arabidopsis thaliana
NYYYACCTAMYWHNN

NNDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MS188_col_a
0.831 0.892
MYB80
M07143_2.00
Arabidopsis thaliana
YYYACCTAMYTWNNN

NNNWARKTAGGTRRR
Dap-seq
OMalley et al.(2016)
MS188_colamp_a
0.831 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400022402 Myb 14 61
PGSC0003DMT400022402 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

Invalid Input OrderBy

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action