PGSC0003DMG400011980 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400011980 T277594_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07924.1
M01278_2.00
Cannabis sativa
NGATHYNNN

NNNRDATCN
PBM
Lambert et al.(2019)
pTH11431
0.810 0.936
ARR11
M00872_2.00
Arabidopsis thaliana
NRATHHNNN

NNNDDATYN
PBM
Franco-Zorrilla et al.(2014)
ARR11
0.668 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400031260 Myb 200 250
PGSC0003DMT400031261 Myb 200 250
PGSC0003DMT400031262 Myb 101 151
PGSC0003DMT400031263 Myb 101 151
PGSC0003DMT400031264 Myb 101 151

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
mgf000016m Mimulus guttatus mgf000016m I 0.834
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I 0.827
Pm006838 Prunus mume Pm006838 I 0.810
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.810
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.810
Cla023064 Citrullus lanatus Cla023064 I 0.810
Ca_11309 Cicer arietinum Ca_11309 I 0.810
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.810
TCM_010701 Theobroma cacao TCM_010701 I 0.810
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.810
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.810
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.810
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.810
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.810
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.810
MDP0000320381 Malus domestica MDP0000320381 I 0.810
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.810
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.810
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.810
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.810
PK07924.1 Cannabis sativa PK07924.1 D 0.810
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.807
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.798
Si000815m.g Setaria italica Si000815m.g I 0.798
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.798
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.798
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.798
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.798
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.798
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.798
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.798
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.798
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.798
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.798
OB01G49660 Oryza brachyantha OB01G49660 I 0.798
OBART01G40940 Oryza barthii OBART01G40940 I 0.798
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.798
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.798
F775_27736 Aegilops tauschii F775_27736 I 0.798
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.798
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.798
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.798
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.798
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.798
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.798
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.798
RR26 Oryza sativa OS01G0904700 I 0.798
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.798
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.798
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.798
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.798
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I 0.791
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I 0.791
mgf004388m Mimulus guttatus mgf004388m I 0.781
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I 0.775
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I 0.775
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I 0.775
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I 0.773
MDP0000305167 Malus domestica MDP0000305167 I 0.756
mgf013006m Mimulus guttatus mgf013006m I 0.756
MDP0000307383 Malus domestica MDP0000307383 I 0.756
orange1.1g027234m.g Citrus sinensis orange1.1g027234m.g I 0.734
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I 0.720
Lus10011389.g Linum usitatissimum Lus10011389.g I 0.720
29929.m004752 Ricinus communis 29929.m004752 I 0.720
Aquca_011_00344 Aquilegia coerulea Aquca_011_00344 I 0.720
Lus10006446.g Linum usitatissimum Lus10006446.g I 0.720
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I 0.714
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.709
Eucgr.H04694 Eucalyptus grandis Eucgr.H04694 I 0.700
cassava32312.m1 Manihot esculenta cassava32312.m1 I 0.696
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I 0.689
Bo6g098710 Brassica oleracea Bo6g098710 I 0.686
Thhalv10018396m.g Eutrema salsugineum Thhalv10018396m.g I 0.686
ARR11 Arabidopsis lyrata scaffold_201596.1 I 0.686
Bo6g105120 Brassica oleracea Bo6g105120 I 0.686
Bostr.26959s0139 Boechera stricta Bostr.26959s0139 I 0.686
Bra004076 Brassica rapa Bra004076 I 0.686
Bra004245 Brassica rapa Bra004245 I 0.686
Carubv10020133m.g Capsella rubella Carubv10020133m.g I 0.686
Cagra.2261s0012 Capsella grandiflora Cagra.2261s0012 I 0.686
Thhalv10000098m.g Eutrema salsugineum Thhalv10000098m.g I 0.677
ARR11 Arabidopsis thaliana AT1G67710 D 0.668
Bra032035 Brassica rapa Bra032035 I 0.662
Bo4g157430 Brassica oleracea Bo4g157430 I 0.662