PGSC0003DMG400015536 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400015536 T277616_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.819 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400040147 Myb 1 43
PGSC0003DMT400040149 Myb 9 56
PGSC0003DMT400040149 Myb 62 107
PGSC0003DMT400040150 Myb 1 43

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc11g073120.1 Solanum lycopersicum Solyc11g073120.1 I 0.909
cassava29437.valid.m1 Manihot esculenta cassava29437.valid.m1 N 0.899
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.899
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.899
Carubv10027237m.g Capsella rubella Carubv10027237m.g N 0.899
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.899
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N 0.899
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.899
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.899
MYB59 Arabidopsis thaliana AT5G59780 D 0.899
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.899
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.896
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.893
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.892
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.892
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.883
Solyc06g005310.2 Solanum lycopersicum Solyc06g005310.2 N 0.883
cassava13590.valid.m1 Manihot esculenta cassava13590.valid.m1 N 0.881
Ca_16710 Cicer arietinum Ca_16710 N 0.881
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.878
Lus10040861.g Linum usitatissimum Lus10040861.g N 0.875
Solyc06g075660.2 Solanum lycopersicum Solyc06g075660.2 N 0.873
PGSC0003DMG400030397 Solanum tuberosum PGSC0003DMG400030397 N 0.873
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.868
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.860
mgf020363m Mimulus guttatus mgf020363m I 0.854
mgf025691m Mimulus guttatus mgf025691m I 0.854
MDP0000143156 Malus domestica MDP0000143156 I 0.849
Cla008413 Citrullus lanatus Cla008413 I 0.847
MDP0000177010 Malus domestica MDP0000177010 I 0.844
Aquca_027_00267 Aquilegia coerulea Aquca_027_00267 N 0.839
PGSC0003DMG402010883 Solanum tuberosum PGSC0003DMG402010883 N 0.834
Solyc06g005330.2 Solanum lycopersicum Solyc06g005330.2 I 0.832
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.831
Traes_1BS_060C24872 Triticum aestivum Traes_1BS_060C24872 N 0.831
Cla013488 Citrullus lanatus Cla013488 I 0.827
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.827
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.819
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I 0.819
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.819
Carubv10017875m.g Capsella rubella Carubv10017875m.g I 0.819
Pm000809 Prunus mume Pm000809 I 0.819
TCM_041904 Theobroma cacao TCM_041904 I 0.819
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I 0.819
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I 0.819
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I 0.819
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.819
Bra018223 Brassica rapa Bra018223 I 0.816
Bo3g130340 Brassica oleracea Bo3g130340 I 0.816
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I 0.814
Si023104m.g Setaria italica Si023104m.g I 0.813
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.813
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.813
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.813
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.813
29788.m000340 Ricinus communis 29788.m000340 I 0.810
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I 0.810
Ca_02593 Cicer arietinum Ca_02593 I 0.808
Lus10005886.g Linum usitatissimum Lus10005886.g I 0.807
Sb05g027370 Sorghum bicolor Sb05g027370 N 0.807
Si026803m.g Setaria italica Si026803m.g I 0.807
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.807
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.807
Pavir.J33560 Panicum virgatum Pavir.J33560 I 0.807
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I 0.802
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I 0.802
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I 0.800
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.800
GSMUA_Achr10G26730_001 Musa acuminata GSMUA_Achr10G26730_001 I 0.794
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.789
Bra020289 Brassica rapa Bra020289 I 0.789
Bo2g025410 Brassica oleracea Bo2g025410 I 0.789
GLYMA12G07110 Glycine max GLYMA12G07110 I 0.788
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I 0.784
ORUFI11G25190 Oryza rufipogon ORUFI11G25190 I 0.784
MYBAS1 Oryza sativa OS11G0700500 I 0.784
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I 0.784
Traes_4BS_61B30E3E4 Triticum aestivum Traes_4BS_61B30E3E4 I 0.784
F775_28589 Aegilops tauschii F775_28589 I 0.784
TRIUR3_16687 Triticum urartu TRIUR3_16687 I 0.784
BGIOSGA033532 Oryza indica BGIOSGA033532 I 0.784
Traes_4DS_0ECE7A421 Triticum aestivum Traes_4DS_0ECE7A421 I 0.784
ORGLA11G0187400 Oryza glaberrima ORGLA11G0187400 I 0.784
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.781
Pavir.J11826 Panicum virgatum Pavir.J11826 I 0.781
Bra006694 Brassica rapa Bra006694 I 0.780
GLYMA11G15180 Glycine max GLYMA11G15180 I 0.779
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.779
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I 0.779
Traes_4AL_8B52D54FD Triticum aestivum Traes_4AL_8B52D54FD I 0.776
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.775
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.768
Bra002533 Brassica rapa Bra002533 I 0.768
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.766
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.766
OB01G54920 Oryza brachyantha OB01G54920 I 0.765
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.761
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.758
F775_06315 Aegilops tauschii F775_06315 I 0.750
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.750
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.746
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.744
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.741
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.741
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.741
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.741
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.741
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.741
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.741
MYBAS2 Oryza sativa OS12G0567300 I 0.741
OBART01G45730 Oryza barthii OBART01G45730 I 0.741
fgenesh2_kg.397__1__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.397__1__AT3G24310.1 N 0.741
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.741
OB12G23080 Oryza brachyantha OB12G23080 I 0.741
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.741
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.741
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.740
OB11G27690 Oryza brachyantha OB11G27690 I 0.739
Bo9g140750 Brassica oleracea Bo9g140750 I 0.738
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.736
Thhalv10022197m.g Eutrema salsugineum Thhalv10022197m.g N 0.724
Sb05g027360 Sorghum bicolor Sb05g027360 I 0.722
Traes_2DL_77F235694 Triticum aestivum Traes_2DL_77F235694 N 0.720
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.718
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.714
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.703
F775_29427 Aegilops tauschii F775_29427 I 0.703
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.703
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.703
Ca_11427 Cicer arietinum Ca_11427 N 0.701
30072.m000986 Ricinus communis 30072.m000986 N 0.701
Lus10009037.g Linum usitatissimum Lus10009037.g I 0.699
OMERI05G01150 Oryza meridionalis OMERI05G01150 I 0.692
ONIVA05G01120 Oryza nivara ONIVA05G01120 I 0.692
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I 0.692
OPUNC05G00970 Oryza punctata OPUNC05G00970 I 0.692
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I 0.692
BGIOSGA019054 Oryza indica BGIOSGA019054 I 0.692
LPERR05G01030 Leersia perrieri LPERR05G01030 I 0.692
OB05G11070 Oryza brachyantha OB05G11070 I 0.692
OBART05G01080 Oryza barthii OBART05G01080 I 0.692
OLONG_004480 Oryza longistaminata OLONG_004480 I 0.692
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I 0.691
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I 0.686
TRIUR3_31527 Triticum urartu TRIUR3_31527 I 0.686
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I 0.686
F775_23572 Aegilops tauschii F775_23572 I 0.686
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I 0.686
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I 0.684
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I 0.684
F775_14172 Aegilops tauschii F775_14172 I 0.684
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I 0.684
Bra015029 Brassica rapa Bra015029 I 0.683
Bo7g033260 Brassica oleracea Bo7g033260 I 0.683
Pavir.J04129 Panicum virgatum Pavir.J04129 I 0.682
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I 0.682
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.679
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.679
Bra028369 Brassica rapa Bra028369 I 0.679
Bra001941 Brassica rapa Bra001941 I 0.679
Bo1g098860 Brassica oleracea Bo1g098860 I 0.679
Bo3g083130 Brassica oleracea Bo3g083130 I 0.679
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.679
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.679
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.679
mgf004640m Mimulus guttatus mgf004640m I 0.679
MYB305 Arabidopsis thaliana AT3G24310 I 0.679
BRADI2G37377 Brachypodium distachyon BRADI2G37377 I 0.678
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.676
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.675
PK16488.1 Cannabis sativa PK16488.1 N 0.674
Ciclev10006469m.g Citrus clementina Ciclev10006469m.g N 0.674
PK22178.1 Cannabis sativa PK22178.1 N 0.674
LjT39N06.160.nd Lotus japonicus LjT39N06.160.nd N 0.671
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I 0.670
Carubv10021411m.g Capsella rubella Carubv10021411m.g I 0.670
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.669
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.669
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.667
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.667
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.667
Si022826m.g Setaria italica Si022826m.g I 0.665
GSMUA_Achr3G21060_001 Musa acuminata GSMUA_Achr3G21060_001 I 0.664
AMTR_s00079p00140660 Amborella trichopoda AMTR_s00079p00140660 I 0.664
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.663
Sb09g001590 Sorghum bicolor Sb09g001590 I 0.663
MDP0000581761 Malus domestica MDP0000581761 N 0.663