PGSC0003DMG400021654 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400021654 T277655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.802 0.871
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.728 0.753
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.728 0.753
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.721 0.763
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.715 0.742
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.715 0.742
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.687 0.710
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.687 0.710
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.673 0.720
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.673 0.720
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.673 0.720
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH

DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.673 0.710
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH

DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.673 0.710
ATY53
M07078_2.00
Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN

NNNNNNNNDDHGKTWGGTRVR
Dap-seq
OMalley et al.(2016)
MYB67_col_a
0.664 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400055763 Myb 14 61
PGSC0003DMT400055763 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

686 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A6H8I1_DANRE Danio rerio A6H8I1_DANRE D 0.000
AAH82636 Xenopus laevis AAH82636 I 0.000
Aan_R010310 Calypte anna Aan_R010310 I 0.000
Aan_R013926 Calypte anna Aan_R013926 I 0.000
Afo_R000853 Aptenodytes forsteri Afo_R000853 I 0.000
Afo_R005099 Aptenodytes forsteri Afo_R005099 I 0.000
Alligator_sinensis_CCG000030.1 Alligator sinensis Alligator_sinensis_CCG000030.1 I 0.000
Alligator_sinensis_CCG006419.1 Alligator sinensis Alligator_sinensis_CCG006419.1 I 0.000
Alligator_sinensis_CCG016574.1 Alligator sinensis Alligator_sinensis_CCG016574.1 I 0.000
Brh_R009202 Buceros rhinoceros Brh_R009202 I 0.000
CGI_10025673 Crassostrea gigas CGI_10025673 I 0.000
Cmyd_10001861 Chelonia mydas Cmyd_10001861 I 0.000
Cmyd_10015637 Chelonia mydas Cmyd_10015637 I 0.000
ENSAMEG00000000531 Ailuropoda melanoleuca ENSAMEG00000000531 I 0.000
ENSAMEG00000007582 Ailuropoda melanoleuca ENSAMEG00000007582 I 0.000
ENSAMEG00000014308 Ailuropoda melanoleuca ENSAMEG00000014308 I 0.000
ENSAMXG00000005838 Astyanax mexicanus ENSAMXG00000005838 I 0.000
ENSAMXG00000008005 Astyanax mexicanus ENSAMXG00000008005 I 0.000
ENSAMXG00000009823 Astyanax mexicanus ENSAMXG00000009823 I 0.000
ENSAMXG00000020635 Astyanax mexicanus ENSAMXG00000020635 I 0.000
ENSAPLG00000003636 Anas platyrhynchos ENSAPLG00000003636 I 0.000
ENSAPLG00000004534 Anas platyrhynchos ENSAPLG00000004534 I 0.000
ENSCSAG00000002201 Chlorocebus sabaeus ENSCSAG00000002201 I 0.000
ENSCSAG00000005806 Chlorocebus sabaeus ENSCSAG00000005806 I 0.000
ENSCSAG00000008476 Chlorocebus sabaeus ENSCSAG00000008476 I 0.000
ENSDORG00000006710 Dipodomys ordii ENSDORG00000006710 I 0.000
ENSFALG00000009151 Ficedula albicollis ENSFALG00000009151 I 0.000
ENSFALG00000012392 Ficedula albicollis ENSFALG00000012392 I 0.000
ENSGALG00000004225 Gallus gallus ENSGALG00000004225 I 0.000
ENSGALG00000013286 Gallus gallus ENSGALG00000013286 I 0.000
ENSGMOG00000011590 Gadus morhua ENSGMOG00000011590 I 0.000
ENSGMOG00000015869 Gadus morhua ENSGMOG00000015869 I 0.000
ENSLACG00000006471 Latimeria chalumnae ENSLACG00000006471 I 0.000
ENSLACG00000012832 Latimeria chalumnae ENSLACG00000012832 I 0.000
ENSLACG00000018441 Latimeria chalumnae ENSLACG00000018441 I 0.000
ENSLOCG00000005104 Lepisosteus oculatus ENSLOCG00000005104 I 0.000
ENSLOCG00000008268 Lepisosteus oculatus ENSLOCG00000008268 I 0.000
ENSMEUG00000001808 Macropus eugenii ENSMEUG00000001808 I 0.000
ENSMEUG00000003370 Macropus eugenii ENSMEUG00000003370 I 0.000
ENSMEUG00000004320 Macropus eugenii ENSMEUG00000004320 I 0.000
ENSMODG00000009064 Monodelphis domestica ENSMODG00000009064 I 0.000
ENSMODG00000012065 Monodelphis domestica ENSMODG00000012065 I 0.000
ENSMPUG00000002104 Mustela putorius furo ENSMPUG00000002104 I 0.000
ENSMPUG00000003692 Mustela putorius furo ENSMPUG00000003692 I 0.000
ENSMPUG00000011968 Mustela putorius furo ENSMPUG00000011968 I 0.000
ENSNLEG00000006301 Nomascus leucogenys ENSNLEG00000006301 I 0.000
ENSNLEG00000016063 Nomascus leucogenys ENSNLEG00000016063 I 0.000
ENSNLEG00000016168 Nomascus leucogenys ENSNLEG00000016168 I 0.000
ENSOARG00000008120 Ovis aries ENSOARG00000008120 I 0.000
ENSOARG00000009415 Ovis aries ENSOARG00000009415 I 0.000
ENSOGAG00000033216 Otolemur garnettii ENSOGAG00000033216 I 0.000
ENSONIG00000009273 Oreochromis niloticus ENSONIG00000009273 I 0.000
ENSONIG00000010829 Oreochromis niloticus ENSONIG00000010829 I 0.000
ENSONIG00000013875 Oreochromis niloticus ENSONIG00000013875 I 0.000
ENSONIG00000018158 Oreochromis niloticus ENSONIG00000018158 I 0.000
ENSP00000366271 Macaca fascicularis ENSP00000366271 I 0.000
ENSP00000366271-D1 Bos grunniens ENSP00000366271-D1 I 0.000
ENSP00000369666 Macaca fascicularis ENSP00000369666 I 0.000
ENSP00000369666-D1 Bos grunniens ENSP00000369666-D1 I 0.000
ENSP00000384903 Macaca fascicularis ENSP00000384903 I 0.000
ENSP00000384903-D1 Bos grunniens ENSP00000384903-D1 I 0.000
ENSPANG00000010861 Papio anubis ENSPANG00000010861 I 0.000
ENSPANG00000010984 Papio anubis ENSPANG00000010984 I 0.000
ENSPANG00000019062 Papio anubis ENSPANG00000019062 I 0.000
ENSPFOG00000008929 Poecilia formosa ENSPFOG00000008929 I 0.000
ENSPFOG00000009817 Poecilia formosa ENSPFOG00000009817 I 0.000
ENSPFOG00000011570 Poecilia formosa ENSPFOG00000011570 I 0.000
ENSPFOG00000016940 Poecilia formosa ENSPFOG00000016940 I 0.000
ENSPFOG00000019763 Poecilia formosa ENSPFOG00000019763 I 0.000
ENSPFOG00000021921 Poecilia formosa ENSPFOG00000021921 I 0.000
ENSPMAG00000006989 Petromyzon marinus ENSPMAG00000006989 I 0.000
ENSPPYG00000003001 Pongo abelii ENSPPYG00000003001 I 0.000
ENSPPYG00000005050 Pongo abelii ENSPPYG00000005050 I 0.000
ENSPPYG00000007294 Pongo abelii ENSPPYG00000007294 I 0.000
ENSPSIG00000002317 Pelodiscus sinensis ENSPSIG00000002317 I 0.000
ENSPSIG00000004862 Pelodiscus sinensis ENSPSIG00000004862 I 0.000
ENSSHAG00000000130 Sarcophilus harrisii ENSSHAG00000000130 I 0.000
ENSSHAG00000010625 Sarcophilus harrisii ENSSHAG00000010625 I 0.000
ENSSHAG00000011039 Sarcophilus harrisii ENSSHAG00000011039 I 0.000
ENSSSCG00000009812 Sus scrofa ENSSSCG00000009812 I 0.000
ENSSTOG00000003355 Ictidomys tridecemlineatus ENSSTOG00000003355 I 0.000
ENSSTOG00000005331 Ictidomys tridecemlineatus ENSSTOG00000005331 I 0.000
ENSSTOG00000027154 Ictidomys tridecemlineatus ENSSTOG00000027154 I 0.000
ENSTNIG00000009085 Tetraodon nigroviridis ENSTNIG00000009085 I 0.000
ENSTSYG00000014726 Tarsius syrichta ENSTSYG00000014726 I 0.000
ENSXMAG00000009962 Xiphophorus maculatus ENSXMAG00000009962 I 0.000
ENSXMAG00000014057 Xiphophorus maculatus ENSXMAG00000014057 I 0.000
ENSXMAG00000015174 Xiphophorus maculatus ENSXMAG00000015174 I 0.000
ENSXMAG00000015985 Xiphophorus maculatus ENSXMAG00000015985 I 0.000
ENSXMAG00000018857 Xiphophorus maculatus ENSXMAG00000018857 I 0.000
e_gw.283.81.1 Branchiostoma floridae e_gw.283.81.1 I 0.000
FBXL19 Tursiops truncatus ENSTTRG00000015474 I 0.000
FBXL19 Tetraodon nigroviridis ENSTNIG00000006493 D 0.000
FBXL19 Takifugu rubripes ENSTRUG00000000468 I 0.000
FBXL19 Ochotona princeps ENSOPRG00000016023 I 0.000
FBXL19 Sus scrofa ENSSSCG00000028186 I 0.000
FBXL19 Procavia capensis ENSPCAG00000010411 I 0.000
Fbxl19 Rattus norvegicus ENSRNOG00000018986 I 0.000
FBXL19 Pteropus vampyrus ENSPVAG00000011046 I 0.000
FBXL19 Otolemur garnettii ENSOGAG00000014408 I 0.000
FBXL19 Dasypus novemcinctus ENSDNOG00000035206 I 0.000
FBXL19 Cavia porcellus ENSCPOG00000022362 I 0.000
Fbxl19 Dipodomys ordii ENSDORG00000010635 I 0.000
FBXL19 Callithrix jacchus ENSCJAG00000002985 I 0.000
FBXL19 Felis catus ENSFCAG00000002585 I 0.000
FBXL19 Equus caballus ENSECAG00000018851 I 0.000
FBXL19 Canis familiaris ENSCAFG00000016736 I 0.000
FBXL19 Homo sapiens ENSG00000099364 I 0.000
FBXL19 Loxodonta africana ENSLAFG00000030638 I 0.000
Fbxl19 Mus musculus ENSMUSG00000030811 I 0.000
FBXL19 Gasterosteus aculeatus ENSGACG00000014763 I 0.000
FBXL19 Oryctolagus cuniculus ENSOCUG00000010641 I 0.000
FBXL19 Anolis carolinensis ENSACAG00000007651 I 0.000
FBXL19 Bos taurus ENSBTAG00000040555 I 0.000
FBXL19 Gorilla gorilla ENSGGOG00000003625 I 0.000
Gfo_R003115 Geospiza fortis Gfo_R003115 I 0.000
Gfo_R013488 Geospiza fortis Gfo_R013488 I 0.000
gw.77.244.1 Branchiostoma floridae gw.77.244.1 I 0.000
ISCW018631 Ixodes scapularis ISCW018631 I 0.000
KDM2A Taeniopygia guttata ENSTGUG00000005980 I 0.000
KDM2A Tupaia belangeri ENSTBEG00000003398 I 0.000
KDM2A Echinops telfairi ENSETEG00000009328 I 0.000
KDM2A Felis catus ENSFCAG00000003383 I 0.000
KDM2A Sus scrofa ENSSSCG00000029637 I 0.000
KDM2A Homo sapiens ENSG00000173120 I 0.000
KDM2A Dasypus novemcinctus ENSDNOG00000002051 I 0.000
KDM2A Erinaceus europaeus ENSEEUG00000010174 I 0.000
KDM2A Anolis carolinensis ENSACAG00000007630 I 0.000
KDM2A Bos taurus ENSBTAG00000044032 I 0.000
KDM2A Canis familiaris ENSCAFG00000011792 I 0.000
KDM2A Choloepus hoffmanni ENSCHOG00000006440 I 0.000
KDM2A Macaca mulatta ENSMMUG00000008771 I 0.000
KDM2A Callithrix jacchus ENSCJAG00000001071 I 0.000
KDM2A Cavia porcellus ENSCPOG00000007134 I 0.000
kdm2a Xenopus tropicalis XB-GENE-5900838 I 0.000
KDM2A Vicugna pacos ENSVPAG00000010644 I 0.000
KDM2A Equus caballus ENSECAG00000025072 I 0.000
KDM2A Sorex araneus ENSSARG00000001832 I 0.000
KDM2A Loxodonta africana ENSLAFG00000006277 I 0.000
KDM2A Meleagris gallopavo ENSMGAG00000010309 D 0.000
KDM2A Gorilla gorilla ENSGGOG00000001636 I 0.000
KDM2A Microcebus murinus ENSMICG00000004044 I 0.000
KDM2A Pan troglodytes ENSPTRG00000003945 I 0.000
KDM2A Monodelphis domestica ENSMODG00000007767 I 0.000
KDM2A Ochotona princeps ENSOPRG00000013564 I 0.000
KDM2A Pteropus vampyrus ENSPVAG00000008538 I 0.000
Kdm2a Mus musculus ENSMUSG00000054611 I 0.000
KDM2A Myotis lucifugus ENSMLUG00000005065 I 0.000
KDM2A Oryctolagus cuniculus ENSOCUG00000009988 I 0.000
KDM2A Procavia capensis ENSPCAG00000011177 I 0.000
KDM2A Otolemur garnettii ENSOGAG00000010623 I 0.000
Kdm2a Rattus norvegicus ENSRNOG00000019145 I 0.000
kdm2aa Tetraodon nigroviridis ENSTNIG00000003239 I 0.000
kdm2aa Takifugu rubripes ENSTRUG00000005339 I 0.000
kdm2aa Danio rerio ENSDARG00000059653 D 0.000
kdm2aa Oryzias latipes ENSORLG00000011075 I 0.000
kdm2aa Gasterosteus aculeatus ENSGACG00000016421 I 0.000
kdm2ab Danio rerio ENSDARG00000078133 I 0.000
kdm2ab Oryzias latipes ENSORLG00000003398 I 0.000
KDM2B Otolemur garnettii ENSOGAG00000000881 I 0.000
KDM2B Oryctolagus cuniculus ENSOCUG00000005961 I 0.000
KDM2B Bos taurus ENSBTAG00000002328 I 0.000
KDM2B Ochotona princeps ENSOPRG00000015228 I 0.000
KDM2B Microcebus murinus ENSMICG00000015572 I 0.000
KDM2B Myotis lucifugus ENSMLUG00000013315 I 0.000
KDM2B Canis familiaris ENSCAFG00000008259 I 0.000
KDM2B Cavia porcellus ENSCPOG00000011011 I 0.000
KDM2B Procavia capensis ENSPCAG00000007401 I 0.000
KDM2B Macaca mulatta ENSMMUG00000021564 I 0.000
KDM2B Callithrix jacchus ENSCJAG00000001555 I 0.000
kdm2b Xenopus tropicalis XB-GENE-990506 I 0.000
KDM2B Dasypus novemcinctus ENSDNOG00000013082 I 0.000
KDM2B Taeniopygia guttata ENSTGUG00000006001 I 0.000
KDM2B Gorilla gorilla ENSGGOG00000014021 I 0.000
KDM2B Tupaia belangeri ENSTBEG00000016315 I 0.000
KDM2B Pan troglodytes ENSPTRG00000005560 I 0.000
KDM2B Sus scrofa ENSSSCG00000029803 I 0.000
KDM2B Felis catus ENSFCAG00000012455 I 0.000
KDM2B Homo sapiens ENSG00000089094 D 0.000
KDM2B Pteropus vampyrus ENSPVAG00000010258 I 0.000
KDM2B Sorex araneus ENSSARG00000008149 I 0.000
Kdm2b Rattus norvegicus ENSRNOG00000025702 I 0.000
Kdm2b Mus musculus ENSMUSG00000029475 I 0.000
KDM2B Equus caballus ENSECAG00000021840 I 0.000
KDM2B Loxodonta africana ENSLAFG00000027865 I 0.000
KDM2B Tursiops truncatus ENSTTRG00000014294 I 0.000
KDM2B Meleagris gallopavo ENSMGAG00000004301 I 0.000
kdm2b.L Xenopus laevis XB-GENE-990512 I 0.000
kdm2ba Gasterosteus aculeatus ENSGACG00000011854 I 0.000
kdm2ba Takifugu rubripes ENSTRUG00000005276 I 0.000
kdm2ba Oryzias latipes ENSORLG00000012943 I 0.000
kdm2ba Danio rerio ENSDARG00000036593 D 0.000
kdm2bb Danio rerio ENSDARG00000046010 I 0.000
kdm2bb Takifugu rubripes ENSTRUG00000010230 I 0.000
kdm2bb Gasterosteus aculeatus ENSGACG00000017026 I 0.000
kdm2bb Oryzias latipes ENSORLG00000008562 I 0.000
LotgiG52553 Lottia gigantea LotgiG52553 I 0.000
Myotis_brandtii_KDM2A_10030797 Myotis brandtii Myotis_brandtii_KDM2A_10030797 I 0.000
Myotis_brandtii_KDM2B_10021721 Myotis brandtii Myotis_brandtii_KDM2B_10021721 I 0.000
NEMVEDRAFT_v1g242923 Nematostella vectensis NEMVEDRAFT_v1g242923 I 0.000
Ocbimv22016485m.g Octopus bimaculoides Ocbimv22016485m.g I 0.000
Ogr01308 Ophisaurus gracilis Ogr01308 I 0.000
Ogr05591 Ophisaurus gracilis Ogr05591 I 0.000
Ogr08491 Ophisaurus gracilis Ogr08491 I 0.000
Pvit_05476 Pogona vitticeps Pvit_05476 I 0.000
Pvit_05626 Pogona vitticeps Pvit_05626 I 0.000
Pvit_16205 Pogona vitticeps Pvit_16205 I 0.000
Sakowv30010450m.g Saccoglossus kowalevskii Sakowv30010450m.g I 0.000
SMAR015271 Strigamia maritima SMAR015271 I 0.000
Tal_R002927 Tyto alba Tal_R002927 I 0.000
tetur13g02300 Tetranychus urticae tetur13g02300 I 0.000