PGSC0003DMG400024299 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400024299 T277671_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.768 0.860
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.730 0.763
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.730 0.763
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.726 0.796
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.726 0.796
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.690 0.710
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.690 0.710
MYB49
M07140_2.00
Arabidopsis thaliana
HDBBYYACCWAMYWH

DWRKTWGGTRRVVHD
Dap-seq
OMalley et al.(2016)
MYB49_col_a
0.678 0.785
MYB49
M07141_2.00
Arabidopsis thaliana
NYYYACCTAMYWHN

NDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB49_colamp_a
0.678 0.785
MYB39
M07106_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH

DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_col_a
0.668 0.742
MYB39
M07107_2.00
Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH

DNDDDDDDDWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_colamp_a
0.668 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400062437 Myb 14 61
PGSC0003DMT400062437 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

463 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.000
BGIOSGA000583 Oryza indica BGIOSGA000583 N 0.000
BGIOSGA012523 Oryza indica BGIOSGA012523 N 0.000
BGIOSGA012525 Oryza indica BGIOSGA012525 N 0.000
BGIOSGA034615 Oryza indica BGIOSGA034615 N 0.000
BGIOSGA034616 Oryza indica BGIOSGA034616 N 0.000
BGIOSGA036759 Oryza indica BGIOSGA036759 N 0.000
BGIOSGA036760 Oryza indica BGIOSGA036760 N 0.000
Bo4g012750 Brassica oleracea Bo4g012750 I 0.000
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N 0.000
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I 0.000
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N 0.000
F775_23296 Aegilops tauschii F775_23296 N 0.000
F775_28648 Aegilops tauschii F775_28648 N 0.000
F775_31089 Aegilops tauschii F775_31089 N 0.000
F775_31341 Aegilops tauschii F775_31341 I 0.000
GLYMA14G36446 Glycine max GLYMA14G36446 I 0.000
GRMZM2G030272 Zea mays GRMZM2G030272 N 0.000
GRMZM2G063216 Zea mays GRMZM2G063216 N 0.000
GRMZM2G065290 Zea mays GRMZM2G065290 I 0.000
GRMZM2G099593 Zea mays GRMZM2G099593 N 0.000
GRMZM2G400559 Zea mays GRMZM2G400559 N 0.000
GRMZM2G461648 Zea mays GRMZM2G461648 N 0.000
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.000
LPERR03G13630 Leersia perrieri LPERR03G13630 N 0.000
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.000
LPERR11G00940 Leersia perrieri LPERR11G00940 N 0.000
LPERR11G00950 Leersia perrieri LPERR11G00950 N 0.000
LPERR12G01060 Leersia perrieri LPERR12G01060 N 0.000
MLOC_34522 Hordeum vulgare MLOC_34522 N 0.000
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.000
MLOC_57051 Hordeum vulgare MLOC_57051 I 0.000
MLOC_57764 Hordeum vulgare MLOC_57764 N 0.000
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.000
OB03G25300 Oryza brachyantha OB03G25300 N 0.000
OB11G10730 Oryza brachyantha OB11G10730 N 0.000
OB12G11010 Oryza brachyantha OB12G11010 N 0.000
OBART03G15470 Oryza barthii OBART03G15470 N 0.000
OBART05G20320 Oryza barthii OBART05G20320 N 0.000
OBART10G05920 Oryza barthii OBART10G05920 N 0.000
OBART11G01070 Oryza barthii OBART11G01070 N 0.000
OBART11G01090 Oryza barthii OBART11G01090 N 0.000
OBART12G00800 Oryza barthii OBART12G00800 N 0.000
OBART12G00820 Oryza barthii OBART12G00820 N 0.000
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N 0.000
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N 0.000
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N 0.000
OGLUM12G01250 Oryza glumaepatula OGLUM12G01250 N 0.000
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N 0.000
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N 0.000
OLONG_001744 Oryza longistaminata OLONG_001744 N 0.000
OLONG_022888 Oryza longistaminata OLONG_022888 N 0.000
OLONG_028722 Oryza longistaminata OLONG_028722 N 0.000
OMERI01G32500 Oryza meridionalis OMERI01G32500 N 0.000
OMERI10G04260 Oryza meridionalis OMERI10G04260 N 0.000
OMERI11G01480 Oryza meridionalis OMERI11G01480 N 0.000
OMERI12G00120 Oryza meridionalis OMERI12G00120 N 0.000
ONIVA01G40380 Oryza nivara ONIVA01G40380 N 0.000
ONIVA03G16490 Oryza nivara ONIVA03G16490 N 0.000
ONIVA05G21450 Oryza nivara ONIVA05G21450 N 0.000
ONIVA11G01010 Oryza nivara ONIVA11G01010 N 0.000
ONIVA11G01030 Oryza nivara ONIVA11G01030 N 0.000
ONIVA12G00800 Oryza nivara ONIVA12G00800 N 0.000
OPUNC01G34290 Oryza punctata OPUNC01G34290 N 0.000
OPUNC03G15030 Oryza punctata OPUNC03G15030 N 0.000
OPUNC10G05310 Oryza punctata OPUNC10G05310 N 0.000
OPUNC11G00930 Oryza punctata OPUNC11G00930 N 0.000
OPUNC11G00940 Oryza punctata OPUNC11G00940 N 0.000
OPUNC12G00950 Oryza punctata OPUNC12G00950 N 0.000
OPUNC12G00960 Oryza punctata OPUNC12G00960 N 0.000
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N 0.000
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N 0.000
ORGLA05G0177300 Oryza glaberrima ORGLA05G0177300 N 0.000
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N 0.000
ORGLA11G0201600 Oryza glaberrima ORGLA11G0201600 N 0.000
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N 0.000
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N 0.000
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N 0.000
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N 0.000
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N 0.000
ORUFI11G01010 Oryza rufipogon ORUFI11G01010 N 0.000
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N 0.000
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N 0.000
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N 0.000
OS03G0321700 Oryza sativa OS03G0321700 N 0.000
OS11G0116900 Oryza sativa OS11G0116900 N 0.000
OS12G0116400 Oryza sativa OS12G0116400 N 0.000
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N 0.000
Pavir.Ea03256 Panicum virgatum Pavir.Ea03256 N 0.000
Pavir.Ga02545 Panicum virgatum Pavir.Ga02545 N 0.000
Pavir.Hb02025 Panicum virgatum Pavir.Hb02025 N 0.000
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N 0.000
Sb01g036870 Sorghum bicolor Sb01g036870 N 0.000
Sb03g038180 Sorghum bicolor Sb03g038180 I 0.000
Sb05g001170 Sorghum bicolor Sb05g001170 N 0.000
Si010706m.g Setaria italica Si010706m.g N 0.000
Si026670m.g Setaria italica Si026670m.g N 0.000
Si027328m.g Setaria italica Si027328m.g N 0.000
Si027769m.g Setaria italica Si027769m.g N 0.000
Si027946m.g Setaria italica Si027946m.g N 0.000
Si027998m.g Setaria italica Si027998m.g N 0.000
Si039519m.g Setaria italica Si039519m.g N 0.000
Traes_1AL_B24F28600 Triticum aestivum Traes_1AL_B24F28600 I 0.000
Traes_1BL_B4AFDB663 Triticum aestivum Traes_1BL_B4AFDB663 I 0.000
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N 0.000
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N 0.000
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N 0.000
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N 0.000
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N 0.000
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N 0.000
TRIUR3_06231 Triticum urartu TRIUR3_06231 N 0.000
TRIUR3_14306 Triticum urartu TRIUR3_14306 I 0.000
TRIUR3_34396 Triticum urartu TRIUR3_34396 I 0.000