PGSC0003DMG400030032 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400030032 T277709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH

DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.881 0.915
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN

NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.842 0.915
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.803 0.872
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.803 0.872
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.673 0.809
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.662 0.702
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.662 0.702
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.662 0.681
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.662 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400077216 Myb 78 128
PGSC0003DMT400077217 Myb 78 129

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

489 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
10438_YHL009C Saccharomyces paradoxus 10438_YHL009C I 0.000
23273_YHL009C Saccharomyces bayanus 23273_YHL009C I 0.000
9588_YHL009C Saccharomyces mikatae 9588_YHL009C I 0.000
AWRI1499_1265 Brettanomyces bruxellensis AWRI1499_1265 N 0.000
BN7_4345 Wickerhamomyces ciferrii BN7_4345 I 0.000
CAGL0M10087g Candida glabrata CAGL0M10087g I 0.000
CANTEDRAFT_114901 Candida tenuis CANTEDRAFT_114901 I 0.000
CaO19.10704 Candida albicans CaO19.10704 I 0.000
CaO19.3193 Candida albicans CaO19.3193 I 0.000
CD36_51520 Candida dubliniensis CD36_51520 I 0.000
CORT_0E05690 Candida orthopsilosis CORT_0E05690 I 0.000
CPAG_03328 Candida parapsilosis CPAG_03328 I 0.000
CTRG_05304 Candida tropicalis CTRG_05304 I 0.000
DEHA2E11616g Debaryomyces hansenii DEHA2E11616g I 0.000
Ecym_2430 Eremothecium cymbalariae Ecym_2430 I 0.000
G210_3388 Candida maltosa G210_3388 I 0.000
KLTH0D05918g Lachancea thermotolerans KLTH0D05918g I 0.000
KLTH0D05918g Kluyveromyces thermotolerans KLTH0D05918g I 0.000
KNAG_0C05680 Kazachstania naganishii KNAG_0C05680 I 0.000
Kwal_7848 Kluyveromyces waltii Kwal_7848 N 0.000
LALA0_S02e02388g Lachancea lanzarotensis LALA0_S02e02388g N 0.000
NCAS_0A12530 Naumovozyma castellii NCAS_0A12530 I 0.000
SAKL0E02420g Lachancea kluyveri SAKL0E02420g I 0.000
Scas_Contig673.3 Saccharomyces castellii Scas_Contig673.3 I 0.000
SKUD_203408 Saccharomyces kudriavzevii SKUD_203408 I 0.000
SU7_1398 Saccharomyces arboricola SU7_1398 I 0.000
TBLA_0I00300 Tetrapisispora blattae TBLA_0I00300 I 0.000
YAP3 Saccharomyces cerevisiae YHL009C D 0.000