CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400030913
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400030913
T277719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.680
0.699
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400079416
Myb
12
59
RGFWKPEEDLILKNCVETHGEGNWATISEKSGLMRSGKSCRLRWKNYL
PGSC0003DMT400079416
Myb
65
110
RGMMSEDEKDLIIRLHKLLGNRWSLIAGRLPGRTDNEVKNFWNTHL
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc07g008010.2
Solanum lycopersicum
Solyc07g008010.2
I
0.909
mgf023205m
Mimulus guttatus
mgf023205m
I
0.841
evm.TU.supercontig_46.32
Carica papaya
evm.TU.supercontig_46.32
I
0.832
AtMYB82
Arabidopsis lyrata
Al_scaffold_0008_1642
I
0.809
cassava32672.m1
Manihot esculenta
cassava32672.m1
I
0.805
gene31098-v1.0-hybrid
Fragaria vesca
gene31098-v1.0-hybrid
I
0.804
Gorai.001G044000
Gossypium raimondii
Gorai.001G044000
I
0.802
Pm027586
Prunus mume
Pm027586
I
0.793
TCM_038131
Theobroma cacao
TCM_038131
I
0.791
Cla016951
Citrullus lanatus
Cla016951
I
0.789
MYB82
Arabidopsis thaliana
AT5G52600
I
0.788
Cagra.0084s0008
Capsella grandiflora
Cagra.0084s0008
I
0.788
Carubv10028642m.g
Capsella rubella
Carubv10028642m.g
I
0.788
MDP0000167314
Malus domestica
MDP0000167314
I
0.786
Bo2g047590
Brassica oleracea
Bo2g047590
I
0.785
MDP0000264051
Malus domestica
MDP0000264051
I
0.783
Bostr.7305s0011
Boechera stricta
Bostr.7305s0011
I
0.783
PRUPE_ppa016532mg
Prunus persica
PRUPE_ppa016532mg
I
0.782
Thhalv10014754m.g
Eutrema salsugineum
Thhalv10014754m.g
I
0.777
Eucgr.C01374
Eucalyptus grandis
Eucgr.C01374
I
0.777
Bra029113
Brassica rapa
Bra029113
I
0.776
Bo3g023140
Brassica oleracea
Bo3g023140
I
0.776
Gorai.004G276500
Gossypium raimondii
Gorai.004G276500
N
0.775
PK01088.1
Cannabis sativa
PK01088.1
I
0.774
Bra022602
Brassica rapa
Bra022602
I
0.774
POPTR_0018s12780
Populus trichocarpa
POPTR_0018s12780
N
0.769
Cucsa.132300
Cucumis sativus
Cucsa.132300
N
0.765
SapurV1A.0034s0330
Salix purpurea
SapurV1A.0034s0330
N
0.745
POPTR_0006s06530
Populus trichocarpa
POPTR_0006s06530
N
0.741
SapurV1A.2191s0020
Salix purpurea
SapurV1A.2191s0020
N
0.729
SapurV1A.0197s0090
Salix purpurea
SapurV1A.0197s0090
N
0.729
GLYMA10G35050
Glycine max
GLYMA10G35050
I
0.722
SELMODRAFT_98669
Selaginella moellendorffii
SELMODRAFT_98669
I
0.711
SELMODRAFT_127220
Selaginella moellendorffii
SELMODRAFT_127220
I
0.711
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
0.704
GLYMA20G32510
Glycine max
GLYMA20G32510
I
0.702
SapurV1A.0710s0050
Salix purpurea
SapurV1A.0710s0050
I
0.701
POPTR_0018s05530
Populus trichocarpa
POPTR_0018s05530
I
0.701
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
0.701
Eucgr.B00866
Eucalyptus grandis
Eucgr.B00866
I
0.700
PDK_20s1310471g002
Phoenix dactylifera
PDK_20s1310471g002
I
0.699
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.699
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.697
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.697
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.696
cassava29820.valid.m1
Manihot esculenta
cassava29820.valid.m1
I
0.690
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.688
Eucgr.K01504
Eucalyptus grandis
Eucgr.K01504
I
0.688
VIT_11s0016g05660
Vitis vinifera
VIT_11s0016g05660
N
0.688
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.688
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.684
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I
0.684
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.683
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.682
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.682
VIT_09s0002g01410
Vitis vinifera
VIT_09s0002g01410
I
0.680
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
0.680
TCM_037379
Theobroma cacao
TCM_037379
I
0.680
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.678
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.678
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.678
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.678
TT2
Arabidopsis thaliana
AT5G35550
I
0.678
Eucgr.C03151
Eucalyptus grandis
Eucgr.C03151
I
0.677
POPTR_0018s05750
Populus trichocarpa
POPTR_0018s05750
I
0.677
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.674
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.673
TCM_037377
Theobroma cacao
TCM_037377
I
0.673
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.672
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
0.671
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
0.671
PK05970.1
Cannabis sativa
PK05970.1
I
0.671
POPTR_0018s05740
Populus trichocarpa
POPTR_0018s05740
I
0.670
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.667
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.667
GLYMA10G35061
Glycine max
GLYMA10G35061
I
0.667
Solyc01g005660.1
Solanum lycopersicum
Solyc01g005660.1
I
0.667
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.666
Si038905m.g
Setaria italica
Si038905m.g
I
0.666
MDP0000211677
Malus domestica
MDP0000211677
I
0.665
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.665
MDP0000209761
Malus domestica
MDP0000209761
I
0.665
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.664
PK14784.1
Cannabis sativa
PK14784.1
I
0.664
evm.TU.supercontig_96.57
Carica papaya
evm.TU.supercontig_96.57
I
0.664
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.664
MDP0000915330
Malus domestica
MDP0000915330
I
0.664
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.664
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.664
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.664
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.664
Aquca_009_00493
Aquilegia coerulea
Aquca_009_00493
I
0.664
GSMUA_Achr3G21000_001
Musa acuminata
GSMUA_Achr3G21000_001
I
0.663
Pm018338
Prunus mume
Pm018338
I
0.661
Eucgr.E01031
Eucalyptus grandis
Eucgr.E01031
I
0.661
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.661
Pm029185
Prunus mume
Pm029185
I
0.661
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.661
Pm005573
Prunus mume
Pm005573
I
0.661