PGSC0003DMG400044141 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400044141 T277756_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400094570 Myb 42 88
PGSC0003DMT400094570 Myb 94 139

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.664
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.686
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.685
Pm024743 Prunus mume Pm024743 I 0.701
Pm000541 Prunus mume Pm000541 I 0.768
Cla019490 Citrullus lanatus Cla019490 I 0.701
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.685
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.681
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.681
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.681
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.673
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.680
TCM_012087 Theobroma cacao TCM_012087 I 0.701
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.701
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.768
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.701
mgf024290m Mimulus guttatus mgf024290m I 0.662
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.676
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.665
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.665
MDP0000319656 Malus domestica MDP0000319656 I 0.768
MDP0000215359 Malus domestica MDP0000215359 I 0.701
Lus10042111.g Linum usitatissimum Lus10042111.g I 0.670
Lus10027695.g Linum usitatissimum Lus10027695.g I 0.669
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.701
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.685
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.723
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.675
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.721
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.721
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.670
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.667
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.744
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.672
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.721
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.692
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.672
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.721
F775_22212 Aegilops tauschii F775_22212 I 0.681
Bra020346 Brassica rapa Bra020346 I 0.700
Bra006744 Brassica rapa Bra006744 I 0.700
Bo3g018490 Brassica oleracea Bo3g018490 I 0.700
Bo2g028290 Brassica oleracea Bo2g028290 I 0.696
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.672
OB06G13860 Oryza brachyantha OB06G13860 I 0.672
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.672
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.672
OS06G0162700 Oryza sativa OS06G0162700 I 0.672
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.672
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.672
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.672
OBART06G04170 Oryza barthii OBART06G04170 I 0.672
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.672
TCM_041651 Theobroma cacao TCM_041651 N 0.750
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.680
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.684
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.747
Solyc09g055650.1 Solanum lycopersicum Solyc09g055650.1 N 0.670
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.909
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.775
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.700
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.700
MYB64 Arabidopsis thaliana AT5G11050 N 0.704
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.713
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.693
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.738
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.730
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.693
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.747
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.676
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.733
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.686
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.716
29681.m001315 Ricinus communis 29681.m001315 N 0.742
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.781
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.722
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.742
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.761
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.667
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.662
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.755
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.721
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.667
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.676
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.730
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.739
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.704
Cla008304 Citrullus lanatus Cla008304 N 0.761