PGSC0003DMG401023433 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG401023433 T277766_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN

NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.701 0.774
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.663 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400060236 Myb 14 61
PGSC0003DMT400060236 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB111 Arabidopsis thaliana AT5G49330 D 0.663
PK06182.1 Cannabis sativa PK06182.1 D 0.701
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.675
Pm008294 Prunus mume Pm008294 I 0.672
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.680
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.666
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.666
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.665
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.665
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.671
Cla009418 Citrullus lanatus Cla009418 I 0.705
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.683
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.662
TCM_021317 Theobroma cacao TCM_021317 I 0.664
TCM_004777 Theobroma cacao TCM_004777 I 0.703
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.674
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.679
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.701
Si039538m.g Setaria italica Si039538m.g I 0.666
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.671
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.676
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.680
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.671
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.689
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.700
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.671
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.666
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.676
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.683
MDP0000607330 Malus domestica MDP0000607330 I 0.671
MDP0000119725 Malus domestica MDP0000119725 I 0.671
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.680
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.740
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.701
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.662
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.677
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.683
Si002107m.g Setaria italica Si002107m.g I 0.686
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.680
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.677
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.710
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.706
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.706
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.678
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.677
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.674
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.667
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.667
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.667
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.667
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.665
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.671
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.666
Bra000453 Brassica rapa Bra000453 I 0.665
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.666
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.704
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.666
LPERR06G00600 Leersia perrieri LPERR06G00600 I 0.666
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.686
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.682
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.661
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.679
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.697
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.683
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.701
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.670
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.674
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.666
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.690
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.666
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.666
OBART03G14380 Oryza barthii OBART03G14380 I 0.666
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.674
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.665
MYB12 Arabidopsis thaliana AT2G47460 I 0.665