CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG402010883
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG402010883
T277772_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400028231
Myb
1
43
MTPQEERLILELHSKWGNRWSRIAREVSGRTDNEIKNYWRTHM
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.B02401
Eucalyptus grandis
Eucgr.B02401
N
0.834
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.834
PGSC0003DMG400015536
Solanum tuberosum
PGSC0003DMG400015536
I
0.834
Bostr.18473s0331
Boechera stricta
Bostr.18473s0331
I
0.834
Carubv10027237m.g
Capsella rubella
Carubv10027237m.g
N
0.834
PGSC0003DMG401010883
Solanum tuberosum
PGSC0003DMG401010883
N
0.834
Cagra.10637s0001
Capsella grandiflora
Cagra.10637s0001
I
0.834
Solyc06g005310.2
Solanum lycopersicum
Solyc06g005310.2
N
0.834
MYB59
Arabidopsis thaliana
AT5G59780
D
0.834
Thhalv10002648m.g
Eutrema salsugineum
Thhalv10002648m.g
I
0.834
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.834
cassava29437.valid.m1
Manihot esculenta
cassava29437.valid.m1
N
0.834
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.834
Cucsa.213500
Cucumis sativus
Cucsa.213500
I
0.830
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.828
GLYMA13G40830
Glycine max
GLYMA13G40830
I
0.827
GLYMA15G04620
Glycine max
GLYMA15G04620
I
0.827
cassava13590.valid.m1
Manihot esculenta
cassava13590.valid.m1
N
0.816
Ca_16710
Cicer arietinum
Ca_16710
N
0.816
MTR_2g096380
Medicago truncatula
MTR_2g096380
I
0.812
Gorai.013G265300
Gossypium raimondii
Gorai.013G265300
I
0.812
Lus10040861.g
Linum usitatissimum
Lus10040861.g
N
0.810
PGSC0003DMG400030397
Solanum tuberosum
PGSC0003DMG400030397
N
0.808
Solyc06g075660.2
Solanum lycopersicum
Solyc06g075660.2
N
0.808
Eucgr.J02073
Eucalyptus grandis
Eucgr.J02073
N
0.803
Pavir.J11500
Panicum virgatum
Pavir.J11500
I
0.782
Pavir.Ca02588
Panicum virgatum
Pavir.Ca02588
I
0.782
Traes_1BS_060C24872
Triticum aestivum
Traes_1BS_060C24872
N
0.782
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.782
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.782
Si023104m.g
Setaria italica
Si023104m.g
I
0.782
MLOC_52439
Hordeum vulgare
MLOC_52439
I
0.782
Si026803m.g
Setaria italica
Si026803m.g
I
0.776
Pavir.J33560
Panicum virgatum
Pavir.J33560
I
0.776
Pavir.J08441
Panicum virgatum
Pavir.J08441
I
0.776
Sb05g027370
Sorghum bicolor
Sb05g027370
N
0.776
Pavir.Hb00058
Panicum virgatum
Pavir.Hb00058
I
0.776
Aquca_027_00267
Aquilegia coerulea
Aquca_027_00267
N
0.774
MLOC_78504
Hordeum vulgare
MLOC_78504
I
0.758
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.754
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.754
BRADI4G09490
Brachypodium distachyon
BRADI4G09490
N
0.750
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.748
GRMZM2G048136
Zea mays
GRMZM2G048136
I
0.727
GLYMA12G07110
Glycine max
GLYMA12G07110
I
0.722
GLYMA11G15180
Glycine max
GLYMA11G15180
I
0.722
fgenesh2_kg.397__1__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.397__1__AT3G24310.1
N
0.701
Thhalv10022197m.g
Eutrema salsugineum
Thhalv10022197m.g
N
0.692
Traes_2DL_77F235694
Triticum aestivum
Traes_2DL_77F235694
N
0.689
Pavir.Gb02200
Panicum virgatum
Pavir.Gb02200
I
0.687