Phyra73031 (Phytophthora ramorum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Phyra73031 T277861_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra73031
M02332_2.00		 Phytophthora ramorum
NDRKTCAGTN
NACTGAMYHN		 PBM
Weirauch et al.(2014)
pTH7816		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02332_2.00 Myb 51 97
M02332_2.00 Myb 103 148
M02332_2.00 Myb 154 198

DNA Binding Domains

Protein ID Domain From To Sequence
Phyra73031 Myb 503 549
Phyra73031 Myb 555 600
Phyra73031 Myb 606 650

Links

Other Myb/SANT family TFs
Other Phytophthora ramorum TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh_scip_prom.28083.4781 Phytophthora lateralis fgenesh_scip_prom.28083.4781 I 0.909
F443_05404 Phytophthora parasitica F443_05404 I 0.906
estExt_Genewise1Plus.C_40041 Phytophthora capsici estExt_Genewise1Plus.C_40041 I 0.906
PITG_16114 Phytophthora infestans PITG_16114 I 0.900
Physo128670 Phytophthora sojae Physo128670 I 0.880
HpaG806491 Hyaloperonospora arabidopsidis HpaG806491 I 0.880
maker-pir_contig_78-snap-gene-0.19 Pythium irregulare maker-pir_contig_78-snap-gene-0.19 I 0.835
PYU1_G009485 Pythium ultimum PYU1_G009485 I 0.835
ALNC14_009780 Albugo laibachii ALNC14_009780 I 0.825
snap_masked-pve_contig_1-abinit-gene-1.66 Pythium vexans snap_masked-pve_contig_1-abinit-gene-1.66 I 0.823
maker-pag1_scaffold_208-fgenesh-gene-0.6 Pythium aphanidermatum maker-pag1_scaffold_208-fgenesh-gene-0.6 I 0.801
Physo127870 Phytophthora sojae Physo127870 I 0.780
F443_09333 Phytophthora parasitica F443_09333 I 0.780
PITG_13133 Phytophthora infestans PITG_13133 I 0.774
HpaG813239 Hyaloperonospora arabidopsidis HpaG813239 I 0.760
SPRG_12165 Saprolegnia parasitica SPRG_12165 I 0.759
maker-pag1_scaffold_987-fgenesh-gene-0.0 Pythium aphanidermatum maker-pag1_scaffold_987-fgenesh-gene-0.0 I 0.758
fgenesh_scip_prom.28083.3149 Phytophthora lateralis fgenesh_scip_prom.28083.3149 I 0.757
estExt_Genewise1.C_230193 Phytophthora capsici estExt_Genewise1.C_230193 I 0.757
Phyra71435 Phytophthora ramorum Phyra71435 I 0.757
maker-par_contig_505-fgenesh-gene-0.4 Pythium arrhenomanes maker-par_contig_505-fgenesh-gene-0.4 I 0.755
ALNC14_087270 Albugo laibachii ALNC14_087270 I 0.739
e_gw1.13.473.1 Phytophthora capsici e_gw1.13.473.1 I 0.682
F443_18023 Phytophthora parasitica F443_18023 I 0.682
fgenesh-piw_contig_33-abinit-gene-0.101 Pythium iwayamai fgenesh-piw_contig_33-abinit-gene-0.101 I 0.682
snap_masked-pir_contig_160-abinit-gene-0.52 Pythium irregulare snap_masked-pir_contig_160-abinit-gene-0.52 I 0.682
PYU1_G013892 Pythium ultimum PYU1_G013892 I 0.682
SPRG_02869 Saprolegnia parasitica SPRG_02869 I 0.673
maker-pve_contig_111-snap-gene-0.29 Pythium vexans maker-pve_contig_111-snap-gene-0.29 I 0.666