POPTR_0001s02910 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0001s02910 T278174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.748 0.870
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s02910.1 Myb 297 346
POPTR_0001s02910.2 Myb 242 292
POPTR_0001s02910.3 Myb 314 364
POPTR_0001s02910.4 Myb 242 292
POPTR_0001s02910.5 Myb 314 364
POPTR_0001s02910.6 Myb 314 364
POPTR_0001s02910.7 Myb 314 364

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

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72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action