POPTR_0001s17020 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0001s17020 T278187_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s17020.1 Myb 544 594

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00009p00103030 Amborella trichopoda AMTR_s00009p00103030 N 0.665
AMTR_s00024p00216510 Amborella trichopoda AMTR_s00024p00216510 N 0.820
Aquca_076_00106 Aquilegia coerulea Aquca_076_00106 N 0.805
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N 0.699
TRFL6 Arabidopsis thaliana AT1G72650 N 0.699
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N 0.699
BRADI3G57300 Brachypodium distachyon BRADI3G57300 N 0.676
PK02666.1 Cannabis sativa PK02666.1 N 0.849
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N 0.699
Carubv10019876m.g Capsella rubella Carubv10019876m.g N 0.699
evm.TU.supercontig_25.106 Carica papaya evm.TU.supercontig_25.106 N 0.901
Ca_10028 Cicer arietinum Ca_10028 N 0.810
Cla015802 Citrullus lanatus Cla015802 N 0.813
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N 0.849
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N 0.849
Cucsa.360310 Cucumis sativus Cucsa.360310 N 0.717
Eucgr.J00905 Eucalyptus grandis Eucgr.J00905 N 0.681
Eucgr.J02823 Eucalyptus grandis Eucgr.J02823 N 0.826
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N 0.717
Thhalv10007199m.g Eutrema salsugineum Thhalv10007199m.g N 0.696
gene07405-v1.0-hybrid Fragaria vesca gene07405-v1.0-hybrid N 0.750
GLYMA16G00870 Glycine max GLYMA16G00870 N 0.881
GLYMA07G04160 Glycine max GLYMA07G04160 N 0.881
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N 0.849
LPERR02G28410 Leersia perrieri LPERR02G28410 N 0.765
Lus10015664.g Linum usitatissimum Lus10015664.g N 0.714
Lus10037678.g Linum usitatissimum Lus10037678.g N 0.714
MDP0000261067 Malus domestica MDP0000261067 N 0.732
MDP0000279204 Malus domestica MDP0000279204 N 0.732
cassava31568.valid.m1 Manihot esculenta cassava31568.valid.m1 N 0.909
cassava159.valid.m1 Manihot esculenta cassava159.valid.m1 N 0.909
MTR_8g020330 Medicago truncatula MTR_8g020330 N 0.781
mgf013194m Mimulus guttatus mgf013194m N 0.800
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N 0.811
OBART02G34530 Oryza barthii OBART02G34530 N 0.765
OB02G41350 Oryza brachyantha OB02G41350 N 0.765
ORGLA02G0298600 Oryza glaberrima ORGLA02G0298600 N 0.765
OGLUM02G35670 Oryza glumaepatula OGLUM02G35670 N 0.765
BGIOSGA009134 Oryza indica BGIOSGA009134 N 0.765
ONIVA02G36570 Oryza nivara ONIVA02G36570 N 0.765
ORUFI02G36040 Oryza rufipogon ORUFI02G36040 N 0.765
OS02G0776700 Oryza sativa OS02G0776700 N 0.765
Pavir.J06110 Panicum virgatum Pavir.J06110 N 0.765
Pavir.Aa00316 Panicum virgatum Pavir.Aa00316 N 0.705
PDK_20s1505221g001 Phoenix dactylifera PDK_20s1505221g001 N 0.881
PDK_20s1327961g002 Phoenix dactylifera PDK_20s1327961g002 N 0.766
PDK_20s1520131g002 Phoenix dactylifera PDK_20s1520131g002 N 0.749
POPTR_0003s06240 Populus trichocarpa POPTR_0003s06240 N 0.909
Pm013286 Prunus mume Pm013286 N 0.732
PRUPE_ppa003052mg Prunus persica PRUPE_ppa003052mg N 0.732
29706.m001295 Ricinus communis 29706.m001295 N 0.909
SapurV1A.5380s0010 Salix purpurea SapurV1A.5380s0010 N 0.849
SapurV1A.0177s0370 Salix purpurea SapurV1A.0177s0370 N 0.899
SapurV1A.0002s0820 Salix purpurea SapurV1A.0002s0820 N 0.849
Si016649m.g Setaria italica Si016649m.g N 0.747
Solyc03g121990.2 Solanum lycopersicum Solyc03g121990.2 N 0.730
PGSC0003DMG400002481 Solanum tuberosum PGSC0003DMG400002481 N 0.826
Sb04g034770 Sorghum bicolor Sb04g034770 N 0.747
TCM_029115 Theobroma cacao TCM_029115 N 0.849
VIT_06s0004g02520 Vitis vinifera VIT_06s0004g02520 N 0.688
VIT_09s0002g01480 Vitis vinifera VIT_09s0002g01480 N 0.909
GRMZM2G049194 Zea mays GRMZM2G049194 N 0.747