POPTR_0002s15900 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0002s15900 T278221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s15900.1 Myb 14 61
POPTR_0002s15900.1 Myb 67 87

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.808
PDK_20s1698071g001 Phoenix dactylifera PDK_20s1698071g001 N 0.780
e_gw1.2.476.1 Physcomitrella patens e_gw1.2.476.1 N 0.749
TRIUR3_30803 Triticum urartu TRIUR3_30803 N 0.743
e_gw1.1.456.1 Physcomitrella patens e_gw1.1.456.1 N 0.743
evm.TU.supercontig_43.122 Carica papaya evm.TU.supercontig_43.122 N 0.738
OS08G0433400 Oryza sativa OS08G0433400 N 0.733
SELMODRAFT_78848 Selaginella moellendorffii SELMODRAFT_78848 N 0.728
SELMODRAFT_78303 Selaginella moellendorffii SELMODRAFT_78303 N 0.728
Ca_16645 Cicer arietinum Ca_16645 N 0.720
SELMODRAFT_90153 Selaginella moellendorffii SELMODRAFT_90153 N 0.713
GLYMA05G17994 Glycine max GLYMA05G17994 N 0.711
evm.TU.supercontig_1993.2 Carica papaya evm.TU.supercontig_1993.2 N 0.706
mgf004018m Mimulus guttatus mgf004018m N 0.694
SELMODRAFT_89380 Selaginella moellendorffii SELMODRAFT_89380 N 0.694
SELMODRAFT_84608 Selaginella moellendorffii SELMODRAFT_84608 N 0.694
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N 0.687
AMTR_s00009p00257990 Amborella trichopoda AMTR_s00009p00257990 N 0.684
Ca_06925 Cicer arietinum Ca_06925 N 0.678
SELMODRAFT_39496 Selaginella moellendorffii SELMODRAFT_39496 N 0.677
SELMODRAFT_39499 Selaginella moellendorffii SELMODRAFT_39499 N 0.677
e_gw1.389.24.1 Physcomitrella patens e_gw1.389.24.1 N 0.673
SELMODRAFT_39507 Selaginella moellendorffii SELMODRAFT_39507 N 0.672
SELMODRAFT_39516 Selaginella moellendorffii SELMODRAFT_39516 N 0.672
OLONG_015294 Oryza longistaminata OLONG_015294 N 0.670
Traes_2BL_216652F6B Triticum aestivum Traes_2BL_216652F6B N 0.669
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.668
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.668
30027.m000837 Ricinus communis 30027.m000837 N 0.664