POPTR_0003s06320 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0003s06320 T278235_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s06320.1 Myb 21 68
POPTR_0003s06320.1 Myb 74 119

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.873
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.853
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.825
Cla012784 Citrullus lanatus Cla012784 N 0.825
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.814
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.814
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.814
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.813
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.808
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.803
TCM_015933 Theobroma cacao TCM_015933 I 0.803
Pm023419 Prunus mume Pm023419 N 0.799
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.799
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.799
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.796
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.792
Pm013277 Prunus mume Pm013277 N 0.791
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.791
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.790
MDP0000124555 Malus domestica MDP0000124555 N 0.790
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.788
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.788
TCM_029126 Theobroma cacao TCM_029126 N 0.788
MDP0000253904 Malus domestica MDP0000253904 N 0.786
MDP0000226215 Malus domestica MDP0000226215 N 0.786
Ca_12762 Cicer arietinum Ca_12762 N 0.782
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.776
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.775
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.775
TCM_037383 Theobroma cacao TCM_037383 I 0.775
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.774
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.772
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.769
MDP0000133817 Malus domestica MDP0000133817 I 0.767
MDP0000143276 Malus domestica MDP0000143276 I 0.767
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.763
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.761
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.758
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.756
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.756
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.755
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.755
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.750
MDP0000931057 Malus domestica MDP0000931057 N 0.749
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.747
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.745
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.745
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.745
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.743
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.743
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.741
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.740
MDP0000261265 Malus domestica MDP0000261265 I 0.740
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.739
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.739
Pm005577 Prunus mume Pm005577 I 0.738
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.738
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.736
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.736
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.734
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.733
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.732
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.731
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.730
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.723
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.723
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.722
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.722
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.721
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.712
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.707
mgf024953m Mimulus guttatus mgf024953m N 0.703
28226.m000839 Ricinus communis 28226.m000839 I 0.702
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.702
mgf018735m Mimulus guttatus mgf018735m N 0.701
TCM_000535 Theobroma cacao TCM_000535 I 0.698
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.695
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.695
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.694
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.693
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.692
TCM_037559 Theobroma cacao TCM_037559 I 0.692
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.692
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.692
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.691
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.691
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.690
TCM_037379 Theobroma cacao TCM_037379 I 0.689
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.689
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.686
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.686
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.686
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.684
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.684
PK08631.1 Cannabis sativa PK08631.1 N 0.683
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.682
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.682
Pm027047 Prunus mume Pm027047 I 0.682
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.680
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.680
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.680
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.680
OB06G16110 Oryza brachyantha OB06G16110 I 0.678
OB03G30160 Oryza brachyantha OB03G30160 I 0.678
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.678
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.678
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.678
MDP0000184538 Malus domestica MDP0000184538 I 0.677
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.677
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.676
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.676
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.675
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.675
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.673
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.673
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.672
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.671
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.671
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.671
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.671
TCM_004509 Theobroma cacao TCM_004509 I 0.671
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.670
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.670
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.670
TCM_010778 Theobroma cacao TCM_010778 I 0.669
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.667
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.667
Pm005572 Prunus mume Pm005572 I 0.667
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.667
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.667
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.666
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.665
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.665
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.664
TCM_037376 Theobroma cacao TCM_037376 I 0.662
Pm005570 Prunus mume Pm005570 I 0.662
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.662
Ca_03154 Cicer arietinum Ca_03154 I 0.662
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.662
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.662
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.662
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.662
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.662
MDP0000210851 Malus domestica MDP0000210851 I 0.662
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.662
Si038905m.g Setaria italica Si038905m.g I 0.662
MDP0000031172 Malus domestica MDP0000031172 I 0.662
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.661
cassava3467.m1 Manihot esculenta cassava3467.m1 N 0.661
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.661
PK16315.1 Cannabis sativa PK16315.1 I 0.661
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.661
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.661