POPTR_0004s08070 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0004s08070 T278261_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KAN1
M00878_2.00
Arabidopsis thaliana
NNRTNBNN

NNVNAYNN
PBM
Franco-Zorrilla et al.(2014)
KAN1
0.909 0.979
KAN1
M02308_2.00
Arabidopsis thaliana
NDNDTAHNHN

NDNDTAHNHN
PBM
Weirauch et al.(2014)
pTH7135
0.909 0.979
KAN2
M07018_2.00
Arabidopsis thaliana
HHHNDWATATTCTYH

DRAGAATATWHNDDD
Dap-seq
OMalley et al.(2016)
KAN2_col_a
0.875 0.979
KAN2
M07019_2.00
Arabidopsis thaliana
NWWTATTCYYH

DRRGAATAWWN
Dap-seq
OMalley et al.(2016)
KAN2_colamp_a
0.875 0.979
KAN4
M00881_2.00
Arabidopsis thaliana
NWNRTBCNN

NNGVAYNWN
PBM
Franco-Zorrilla et al.(2014)
KAN4
0.821 0.936
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0004s08070.1 Myb 298 349

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_089350 Aspergillus clavatus CADACLAG00008334 I 0.000
AFUA_2G05310 Aspergillus fumigatus CADAFUAG00003857 I 0.000
ANIA_07508 Aspergillus nidulans CADANIAG00000607 D 0.000
ATEG_06724 Aspergillus terreus CADATEAG00007661 I 0.000
BDDG_07798 Blastomyces dermatitidis BDDG_07798 I 0.000
CADAFLAG00010000 Aspergillus flavus CADAFLAG00010000 I 0.000
CADANGAG00009177 Aspergillus niger CADANGAG00009177 I 0.000
CADAORAG00000578 Aspergillus oryzae CADAORAG00000578 I 0.000
CIMG_00707 Coccidioides immitis CIMG_00707 I 0.000
CPC735_055700 Coccidioides posadasii CPC735_055700 I 0.000
EURHEDRAFT_459274 Aspergillus ruber EURHEDRAFT_459274 I 0.000
fgenesh1_pg.00107_#_3 Aspergillus carbonarius fgenesh1_pg.00107_#_3 I 0.000
H101_07310 Trichophyton interdigitale H101_07310 I 0.000
H102_03688 Trichophyton rubrum H102_03688 I 0.000
H105_03714 Trichophyton soudanense H105_03714 I 0.000
HCBG_04926 Histoplasma capsulatum HCBG_04926 I 0.000
MCYG_03587 Microsporum canis MCYG_03587 I 0.000
MCYG_03587 Arthroderma otae MCYG_03587 I 0.000
MGYG_03194 Microsporum gypseum MGYG_03194 I 0.000
MPH_03438 Macrophomina phaseolina MPH_03438 I 0.000
NFIA_082070 Neosartorya fischeri CADNFIAG00007053 I 0.000
PAAG_02303 Paracoccidioides sp lutzii PAAG_02303 I 0.000
PABG_12017 Paracoccidioides brasiliensis PABG_12017 I 0.000
Pc22g09340 Penicillium chrysogenum Pc22g09340 I 0.000
PCH_Pc22g09340 Penicillium rubens PCH_Pc22g09340 I 0.000
PDE_06962 Penicillium oxalicum PDE_06962 I 0.000
PDIP_86520 Penicillium digitatum PDIP_86520 I 0.000
PEX1_004520 Penicillium expansum PEX1_004520 I 0.000
PITC_007670 Penicillium italicum PITC_007670 I 0.000
PMAA_073470 Talaromyces marneffei PMAA_073470 I 0.000
PMAA_073470 Penicillium marneffei PMAA_073470 I 0.000
TEQG_01304 Trichophyton equinum TEQG_01304 N 0.000
TESG_08527 Trichophyton tonsurans TESG_08527 I 0.000
TSTA_093850 Talaromyces stipitatus TSTA_093850 I 0.000
U727_0043359041 Penicillium solitum U727_0043359041 I 0.000
UREG_00698 Uncinocarpus reesii UREG_00698 I 0.000