POPTR_0005s22750 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0005s22750 T278290_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s22750.1 Myb 19 68

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0076s0110 Salix purpurea SapurV1A.0076s0110 N 0.813
SapurV1A.1979s0020 Salix purpurea SapurV1A.1979s0020 N 0.813
SapurV1A.0354s0280 Salix purpurea SapurV1A.0354s0280 I 0.779
POPTR_0002s05770 Populus trichocarpa POPTR_0002s05770 I 0.741
VIT_12s0028g00980 Vitis vinifera VIT_12s0028g00980 I 0.731
evm.TU.supercontig_2794.2 Carica papaya evm.TU.supercontig_2794.2 I 0.722
MDP0000312944 Malus domestica MDP0000312944 I 0.715
Cla014669 Citrullus lanatus Cla014669 I 0.715
Lus10029808.g Linum usitatissimum Lus10029808.g I 0.707
MDP0000217637 Malus domestica MDP0000217637 I 0.707
LjSGA_025887.1 Lotus japonicus LjSGA_025887.1 N 0.703
mgf023762m Mimulus guttatus mgf023762m I 0.702
orange1.1g043383m.g Citrus sinensis orange1.1g043383m.g I 0.698
LjT01P07.20.nd Lotus japonicus LjT01P07.20.nd I 0.696
Pm009670 Prunus mume Pm009670 I 0.696
Cucsa.045140 Cucumis sativus Cucsa.045140 I 0.689
PRUPE_ppa014847mg Prunus persica PRUPE_ppa014847mg I 0.689
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.689
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.687
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.687
Si039234m.g Setaria italica Si039234m.g I 0.687
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.687
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I 0.685
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I 0.685
TCM_001942 Theobroma cacao TCM_001942 I 0.683
PDK_20s1474441g001 Phoenix dactylifera PDK_20s1474441g001 I 0.675
VIT_08s0058g00250 Vitis vinifera VIT_08s0058g00250 I 0.674
Aquca_021_00207 Aquilegia coerulea Aquca_021_00207 I 0.674
PRUPE_ppa023518mg Prunus persica PRUPE_ppa023518mg I 0.672
Cla023595 Citrullus lanatus Cla023595 N 0.672
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.669
Ca_00645 Cicer arietinum Ca_00645 I 0.669
29842.m003572 Ricinus communis 29842.m003572 I 0.669
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.669
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.669
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.669
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.669
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.669
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.669
Eucgr.A02031 Eucalyptus grandis Eucgr.A02031 I 0.669
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.669
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.669
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.665
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.665
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.663
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.663
orange1.1g038544m.g Citrus sinensis orange1.1g038544m.g N 0.663
MDP0000214282 Malus domestica MDP0000214282 I 0.661
MDP0000196504 Malus domestica MDP0000196504 I 0.661
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.661