TF Information

POPTR_0006s23810 *(Populus trichocarpa)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	POPTR_0006s23810	T278312_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.699	0.742
MYB111 M00882_2.00	Arabidopsis thaliana	NNNAMCDAMY	RKTHGKTNNN	PBM Franco-Zorrilla et al.(2014) MYB111	0.676	0.699
Gam1 M02703_2.00	Hordeum vulgare	NVYAACSGMC	GKCSGTTRBN	SELEX Mathelier et al.(2014) MA0034.1	0.665	0.613
Gam1 M11061_2.00	Hordeum vulgare	YAACSRHM	KDYSGTTR	Transfac Matys et al.(2006) P$GAMYB_01	0.665	0.613
ATMYB13 M06999_2.00	Arabidopsis thaliana	HYCACCWACCHHHNH	DNDDDGGTWGGTGRD	Dap-seq OMalley et al.(2016) MYB13_col_a	0.661	0.624
ATMYB13 M07000_2.00	Arabidopsis thaliana	BYCACCWACCHHHNNHNN	NNDNNDDDGGTWGGTGRV	Dap-seq OMalley et al.(2016) MYB13_colamp_a	0.661	0.624
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
POPTR_0006s23810.1	Myb	11	58	RGTWTATEDKILTAYVRNYGEGNWARVPKETGLKRCGKSCRLRWLNYL
POPTR_0006s23810.1	Myb	64	109	RGNISPDEEDLIIRLHKLLGNRWALIAGRIPGRTDNEIKNYWNSTL
POPTR_0006s23810.2	Myb	11	32	TVIGTGLKRCGKSCRLRWLNYL
POPTR_0006s23810.2	Myb	38	83	RGNISPDEEDLIIRLHKLLGNRWALIAGRIPGRTDNEIKNYWNSTL
POPTR_0006s23810.3	Myb	11	35	LGFQRKQASLKRCGKSCRLRWLNYL
POPTR_0006s23810.3	Myb	41	86	RGNISPDEEDLIIRLHKLLGNRWALIAGRIPGRTDNEIKNYWNSTL

Links
Other Myb/SANT family TFs
Other *Populus trichocarpa* TFs

Invalid Input OrderBy

527 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action