AtMYB40 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0008s18110 T278358_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH

DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.662 0.667
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH

DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.662 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s18110.1 Myb 14 61
POPTR_0008s18110.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AFAF005680 Anopheles farauti AFAF005680 I 0.000
DILT_0000717101 Diphyllobothrium latum DILT_0000717101 I 0.000
SPER_0003407301 Spirometra erinaceieuropaei SPER_0003407301 I 0.000
SPER_0003947201 Spirometra erinaceieuropaei SPER_0003947201 I 0.000
SSLN_0001903801 Schistocephalus solidus SSLN_0001903801 I 0.000