POPTR_0009s03240 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0009s03240 T278365_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN

NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.866 0.935
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0009s03240.1 Myb 10 57
POPTR_0009s03240.1 Myb 63 108

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.909
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.909
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I 0.869
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.866
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I 0.866
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.866
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.866
Carubv10017875m.g Capsella rubella Carubv10017875m.g I 0.866
TCM_041904 Theobroma cacao TCM_041904 I 0.866
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.866
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.866
MYB59 Arabidopsis thaliana AT5G59780 D 0.866
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I 0.866
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I 0.860
29788.m000340 Ricinus communis 29788.m000340 I 0.860
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.858
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I 0.858
Lus10005886.g Linum usitatissimum Lus10005886.g I 0.854
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I 0.849
Bo3g130340 Brassica oleracea Bo3g130340 I 0.838
Bra018223 Brassica rapa Bra018223 I 0.838
Bra020289 Brassica rapa Bra020289 I 0.836
Bo2g025410 Brassica oleracea Bo2g025410 I 0.836
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I 0.833
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I 0.832
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I 0.832
Pm000809 Prunus mume Pm000809 I 0.832
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I 0.832
MDP0000177010 Malus domestica MDP0000177010 I 0.832
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.829
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.829
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.827
Cla013488 Citrullus lanatus Cla013488 I 0.827
MDP0000143156 Malus domestica MDP0000143156 I 0.827
Cla008413 Citrullus lanatus Cla008413 I 0.825
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.825
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.823
Ca_02593 Cicer arietinum Ca_02593 I 0.821
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.821
Bra006694 Brassica rapa Bra006694 I 0.818
Bo9g140750 Brassica oleracea Bo9g140750 I 0.815
Bra002533 Brassica rapa Bra002533 I 0.815
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I 0.815
GSMUA_Achr10G26730_001 Musa acuminata GSMUA_Achr10G26730_001 I 0.813
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.812
Si026803m.g Setaria italica Si026803m.g I 0.795
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.795
F775_29427 Aegilops tauschii F775_29427 I 0.791
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.791
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.791
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.791
Traes_4BS_61B30E3E4 Triticum aestivum Traes_4BS_61B30E3E4 I 0.790
MYBAS1 Oryza sativa OS11G0700500 I 0.790
TRIUR3_16687 Triticum urartu TRIUR3_16687 I 0.790
ORUFI11G25190 Oryza rufipogon ORUFI11G25190 I 0.790
ORGLA11G0187400 Oryza glaberrima ORGLA11G0187400 I 0.790
F775_28589 Aegilops tauschii F775_28589 I 0.790
BGIOSGA033532 Oryza indica BGIOSGA033532 I 0.790
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.790
Traes_4DS_0ECE7A421 Triticum aestivum Traes_4DS_0ECE7A421 I 0.790
Traes_4AL_8B52D54FD Triticum aestivum Traes_4AL_8B52D54FD I 0.782
Solyc11g073120.1 Solanum lycopersicum Solyc11g073120.1 I 0.779
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I 0.779
GLYMA12G07110 Glycine max GLYMA12G07110 I 0.779
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.777
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.777
F775_06315 Aegilops tauschii F775_06315 I 0.777
mgf020363m Mimulus guttatus mgf020363m I 0.777
mgf025691m Mimulus guttatus mgf025691m I 0.777
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.772
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.772
GLYMA11G15180 Glycine max GLYMA11G15180 I 0.770
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.768
Si023104m.g Setaria italica Si023104m.g I 0.768
MYBAS2 Oryza sativa OS12G0567300 I 0.768
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.768
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.768
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.768
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.768
Solyc06g005330.2 Solanum lycopersicum Solyc06g005330.2 I 0.768
OB12G23080 Oryza brachyantha OB12G23080 I 0.768
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.768
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.768
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.768
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.768
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.768
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.765
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.764
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.763
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.760
Pavir.J11826 Panicum virgatum Pavir.J11826 I 0.760
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.754
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.751
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.750
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I 0.748
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.746
OB11G27690 Oryza brachyantha OB11G27690 I 0.745
OB01G54920 Oryza brachyantha OB01G54920 I 0.745
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.741
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.735
Pavir.J33560 Panicum virgatum Pavir.J33560 I 0.735
Sb05g027360 Sorghum bicolor Sb05g027360 I 0.728
OBART01G45730 Oryza barthii OBART01G45730 I 0.720
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.720
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.720
Pavir.Gb02200 Panicum virgatum Pavir.Gb02200 I 0.720
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.720
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.720
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.720
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.718
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I 0.716
Pavir.J04129 Panicum virgatum Pavir.J04129 I 0.716
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.715
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.715
BRADI2G37377 Brachypodium distachyon BRADI2G37377 I 0.712
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.710
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.709
F775_23572 Aegilops tauschii F775_23572 I 0.707
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I 0.707
TRIUR3_31527 Triticum urartu TRIUR3_31527 I 0.707
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I 0.707
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I 0.707
Pm009050 Prunus mume Pm009050 I 0.706
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.706
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.706
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.706
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.706
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.706
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.706
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.706
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.703
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.703
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.703
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.703
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.703
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.703
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.702
TCM_022293 Theobroma cacao TCM_022293 I 0.701
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.701
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.700
Si022826m.g Setaria italica Si022826m.g I 0.698
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I 0.697
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I 0.697
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I 0.697
F775_14172 Aegilops tauschii F775_14172 I 0.697
Ca_07872 Cicer arietinum Ca_07872 I 0.695
Si024470m.g Setaria italica Si024470m.g I 0.694
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.694
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.694
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I 0.690
OLONG_004480 Oryza longistaminata OLONG_004480 I 0.690
OBART05G01080 Oryza barthii OBART05G01080 I 0.690
BGIOSGA019054 Oryza indica BGIOSGA019054 I 0.690
LPERR05G01030 Leersia perrieri LPERR05G01030 I 0.690
OB05G11070 Oryza brachyantha OB05G11070 I 0.690
OMERI05G01150 Oryza meridionalis OMERI05G01150 I 0.690
ONIVA05G01120 Oryza nivara ONIVA05G01120 I 0.690
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I 0.690
OPUNC05G00970 Oryza punctata OPUNC05G00970 I 0.690
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.686
evm.TU.supercontig_14.220 Carica papaya evm.TU.supercontig_14.220 I 0.686
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.686
Sb09g001590 Sorghum bicolor Sb09g001590 I 0.686
AMTR_s00039p00172240 Amborella trichopoda AMTR_s00039p00172240 I 0.685
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.685
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.684
MDP0000183451 Malus domestica MDP0000183451 I 0.682
MDP0000133412 Malus domestica MDP0000133412 I 0.682
GLYMA08G27660 Glycine max GLYMA08G27660 I 0.682
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.681
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I 0.680
Bra015029 Brassica rapa Bra015029 I 0.680
Bo7g033260 Brassica oleracea Bo7g033260 I 0.680
Lus10009037.g Linum usitatissimum Lus10009037.g I 0.677
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.676
mgf004640m Mimulus guttatus mgf004640m I 0.676
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I 0.676
Ca_20437 Cicer arietinum Ca_20437 I 0.676
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.676
Cla007745 Citrullus lanatus Cla007745 I 0.676
MYB305 Arabidopsis thaliana AT3G24310 I 0.676
Bo1g098860 Brassica oleracea Bo1g098860 I 0.676
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.676
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.676
Bra028369 Brassica rapa Bra028369 I 0.676
Bra001941 Brassica rapa Bra001941 I 0.676
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.676
TCM_021037 Theobroma cacao TCM_021037 I 0.676
Bo3g083130 Brassica oleracea Bo3g083130 I 0.676
Lus10014453.g Linum usitatissimum Lus10014453.g I 0.674
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.674
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.674
Cucsa.255900 Cucumis sativus Cucsa.255900 I 0.673
Cucsa.252400 Cucumis sativus Cucsa.252400 I 0.673
Cucsa.383230 Cucumis sativus Cucsa.383230 I 0.673
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.673
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I 0.673
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I 0.673
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.673
Cla021798 Citrullus lanatus Cla021798 I 0.673
Cla022143 Citrullus lanatus Cla022143 I 0.673
Thhalv10001584m.g Eutrema salsugineum Thhalv10001584m.g I 0.671
Bo00954s080 Brassica oleracea Bo00954s080 I 0.671
Cagra.6400s0003 Capsella grandiflora Cagra.6400s0003 I 0.671
Bo4g198510 Brassica oleracea Bo4g198510 I 0.671
OB07G32480 Oryza brachyantha OB07G32480 I 0.671
ATMYB2 Arabidopsis lyrata fgenesh2_kg.4__2955__AT2G47190.1 I 0.671
Bostr.25993s0044 Boechera stricta Bostr.25993s0044 I 0.671
Bra021389 Brassica rapa Bra021389 I 0.671
Bra004473 Brassica rapa Bra004473 I 0.671
Carubv10023831m.g Capsella rubella Carubv10023831m.g I 0.671
ATMYB2 Arabidopsis thaliana AT2G47190 I 0.671
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.670
Pavir.J28445 Panicum virgatum Pavir.J28445 I 0.669
GRMZM2G134279 Zea mays GRMZM2G134279 I 0.669
Sb01g037110 Sorghum bicolor Sb01g037110 I 0.669
Pavir.J39490 Panicum virgatum Pavir.J39490 I 0.669
Si035722m.g Setaria italica Si035722m.g I 0.669
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.668
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.668
GSMUA_Achr4G29230_001 Musa acuminata GSMUA_Achr4G29230_001 I 0.668
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.668
TCM_018971 Theobroma cacao TCM_018971 I 0.668
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I 0.667
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I 0.667
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.667
F775_14949 Aegilops tauschii F775_14949 I 0.667
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I 0.667
PK10274.1 Cannabis sativa PK10274.1 I 0.667
evm.TU.supercontig_145.21 Carica papaya evm.TU.supercontig_145.21 I 0.667
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.666
Cla019255 Citrullus lanatus Cla019255 I 0.666
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.666
Cucsa.111120 Cucumis sativus Cucsa.111120 I 0.666
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.666
Pm015392 Prunus mume Pm015392 I 0.666
GSMUA_Achr8G12710_001 Musa acuminata GSMUA_Achr8G12710_001 I 0.666
GSMUA_Achr1G24960_001 Musa acuminata GSMUA_Achr1G24960_001 I 0.666
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.666
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.666
GLYMA06G38340 Glycine max GLYMA06G38340 I 0.665
GLYMA04G26650 Glycine max GLYMA04G26650 I 0.665
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.665
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.664
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.664
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.663
OS01G0128000 Oryza sativa OS01G0128000 I 0.663
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.663
Si010822m.g Setaria italica Si010822m.g I 0.663
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.662
GLYMA10G33450 Glycine max GLYMA10G33450 I 0.662
Pavir.J37992 Panicum virgatum Pavir.J37992 I 0.662
BGIOSGA006030 Oryza indica BGIOSGA006030 I 0.662
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I 0.662
Si018007m.g Setaria italica Si018007m.g I 0.662
OBART02G24300 Oryza barthii OBART02G24300 I 0.662
OB02G31640 Oryza brachyantha OB02G31640 I 0.662
OMERI02G23750 Oryza meridionalis OMERI02G23750 I 0.662
ONIVA09G12460 Oryza nivara ONIVA09G12460 I 0.662
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I 0.662
OPUNC02G22200 Oryza punctata OPUNC02G22200 I 0.662
Sb04g026210 Sorghum bicolor Sb04g026210 I 0.662
MLOC_6786 Hordeum vulgare MLOC_6786 I 0.662
GRMZM2G027697 Zea mays GRMZM2G027697 I 0.662
GLYMA20G34140 Glycine max GLYMA20G34140 I 0.662
GRMZM2G043792 Zea mays GRMZM2G043792 I 0.662
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I 0.662
OS02G0618400 Oryza sativa OS02G0618400 I 0.662
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I 0.662
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I 0.662
Traes_5BS_95A52A87F Triticum aestivum Traes_5BS_95A52A87F I 0.661
Traes_5DS_DE2C70E4C Triticum aestivum Traes_5DS_DE2C70E4C I 0.661
F775_08129 Aegilops tauschii F775_08129 I 0.661
GLYMA03G38070 Glycine max GLYMA03G38070 I 0.661
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.661
MLOC_6821 Hordeum vulgare MLOC_6821 I 0.661
GLYMA19G40670 Glycine max GLYMA19G40670 I 0.661