CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XM_002315148.1
(
Populus trichocarpa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
POPTR_0010s20220
T278402_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0010s20220.1
Myb
22
63
TDEEDRIIIAAHAKHGNKWAAIARLLPGRTDNSIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Populus trichocarpa
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0008s06310
Populus trichocarpa
POPTR_0008s06310
N
0.875
Ca_27473
Cicer arietinum
Ca_27473
N
0.803
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.769
LjSGA_068650.1
Lotus japonicus
LjSGA_068650.1
N
0.743
PDK_20s1413971g002
Phoenix dactylifera
PDK_20s1413971g002
N
0.736
HpaG806203
Hyaloperonospora arabidopsidis
HpaG806203
N
0.730
GRMZM2G169316
Zea mays
GRMZM2G169316
I
0.721
mgf016718m
Mimulus guttatus
mgf016718m
N
0.705
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.697
GRMZM2G005112
Zea mays
GRMZM2G005112
N
0.692
Bo24301s010
Brassica oleracea
Bo24301s010
N
0.661