POPTR_0011s04010 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0011s04010 T278409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0011s04010.1 Myb 40 87
POPTR_0011s04010.1 Myb 93 138

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.798
TCM_033016 Theobroma cacao TCM_033016 N 0.787
TCM_033015 Theobroma cacao TCM_033015 N 0.777
29933.m001454 Ricinus communis 29933.m001454 N 0.767
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.761
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.758
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.758
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.752
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.735
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.728
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.723
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.722
MDP0000289283 Malus domestica MDP0000289283 I 0.717
MDP0000131822 Malus domestica MDP0000131822 I 0.713
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.704
Pm009880 Prunus mume Pm009880 N 0.704
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.704
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.703
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.702
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.701
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.699
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.695
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.695
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.694
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.694
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.693
TCM_030020 Theobroma cacao TCM_030020 I 0.690
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.688
TCM_007865 Theobroma cacao TCM_007865 I 0.683
MDP0000155426 Malus domestica MDP0000155426 I 0.683
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.679
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.678
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.677
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.676
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.675
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.675
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.670
Pm015302 Prunus mume Pm015302 N 0.670
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.666
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.665
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.664
MDP0000407613 Malus domestica MDP0000407613 N 0.663
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.661
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.661