POPTR_0012s09780 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0012s09780 T278426_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s09780.1 Myb 822 881

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0841s0060 Salix purpurea SapurV1A.0841s0060 N 0.899
SapurV1A.0168s0020 Salix purpurea SapurV1A.0168s0020 N 0.824
emb2746 Vitis vinifera VIT_17s0000g01640 N 0.782
Bostr.0568s0468 Boechera stricta Bostr.0568s0468 N 0.762
Bo3g103450 Brassica oleracea Bo3g103450 N 0.762
Bra038629 Brassica rapa Bra038629 N 0.762
Thhalv10003624m.g Eutrema salsugineum Thhalv10003624m.g N 0.762
Carubv10027519m.g Capsella rubella Carubv10027519m.g N 0.760
Cagra.0248s0020 Capsella grandiflora Cagra.0248s0020 N 0.760
emb2746 Arabidopsis thaliana AT5G63420 N 0.740
Lus10016758.g Linum usitatissimum Lus10016758.g N 0.738
gene06358-v1.0-hybrid Fragaria vesca gene06358-v1.0-hybrid N 0.722
gene06360-v1.0-hybrid Fragaria vesca gene06360-v1.0-hybrid N 0.722
PRUPE_ppa001238mg Prunus persica PRUPE_ppa001238mg N 0.712
Pm024489 Prunus mume Pm024489 N 0.712
Pavir.Ab01874 Panicum virgatum Pavir.Ab01874 N 0.703
Si016284m.g Setaria italica Si016284m.g N 0.703
evm.TU.supercontig_13.140 Carica papaya evm.TU.supercontig_13.140 N 0.700
AMTR_s00009p00241540 Amborella trichopoda AMTR_s00009p00241540 N 0.694
orange1.1g016319m.g Citrus sinensis orange1.1g016319m.g N 0.684
Gorai.001G059600 Gossypium raimondii Gorai.001G059600 N 0.682
MDP0000574910 Malus domestica MDP0000574910 N 0.677
MDP0000313526 Malus domestica MDP0000313526 N 0.677
LPERR02G15710 Leersia perrieri LPERR02G15710 N 0.671
GRMZM2G326783 Zea mays GRMZM2G326783 N 0.665
orange1.1g040954m.g Citrus sinensis orange1.1g040954m.g N 0.665
Ciclev10018763m.g Citrus clementina Ciclev10018763m.g N 0.665
GRMZM2G134439 Zea mays GRMZM2G134439 N 0.662