POPTR_0012s13900 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0012s13900 T278429_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s13900.1 Myb 144 194
POPTR_0012s13900.2 Myb 144 194

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.831
SapurV1A.0400s0190 Salix purpurea SapurV1A.0400s0190 N 0.815
30147.m014309 Ricinus communis 30147.m014309 N 0.807
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.792
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.792
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.792
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.758
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.758
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.727
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.727
TCM_015085 Theobroma cacao TCM_015085 I 0.720
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.719
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.714
mgf019327m Mimulus guttatus mgf019327m N 0.713
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.705
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.701
Cla006313 Citrullus lanatus Cla006313 N 0.701
mgf018042m Mimulus guttatus mgf018042m N 0.698
ARR21 Arabidopsis thaliana AT5G07210 N 0.695
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.694
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.680
Cla007104 Citrullus lanatus Cla007104 N 0.680
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.678
Carubv10006317m.g Capsella rubella Carubv10006317m.g N 0.676
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.674
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.671
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.671
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.671
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.668
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.667
Bo2g007540 Brassica oleracea Bo2g007540 N 0.664
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.664
Bra009284 Brassica rapa Bra009284 N 0.664
Bra028705 Brassica rapa Bra028705 N 0.664
MDP0000228719 Malus domestica MDP0000228719 N 0.664
Bo9g175250 Brassica oleracea Bo9g175250 N 0.664