TF Information

POPTR_0017s11880 *(Populus trichocarpa)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	POPTR_0017s11880	T278508_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB30 M07089_2.00	Arabidopsis thaliana	NHHHCAACYACYWHH	DDWRGTRGTTGDDDN	Dap-seq OMalley et al.(2016) MYB30_col_a	0.878	0.946
MYB30 M07090_2.00	Arabidopsis thaliana	HHHYYHCCAACYAMY	RKTRGTTGGDRRDDD	Dap-seq OMalley et al.(2016) MYB30_colamp_a	0.878	0.946
MYB94 M02298_2.00	Arabidopsis thaliana	DACCGGTH	DACCGGTH	PBM Weirauch et al.(2014) pTH7085	0.867	0.925
MYB94 M07094_2.00	Arabidopsis thaliana	HHNYHYCAACYACYWHHNN	NNDDWRGTRGTTGRDRNDD	Dap-seq OMalley et al.(2016) MYB94_col_b	0.867	0.925
MYB60 M07001_2.00	Arabidopsis thaliana	HNNHYYCAACYACYWHHNN	NNDDWRGTRGTTGRRDNND	Dap-seq OMalley et al.(2016) MYB60_col	0.864	0.925
MYB96 M07153_2.00	Arabidopsis thaliana	HHHHHYHHCCAACYAHYWNHN	NDNWRDTRGTTGGDDRDDDDD	Dap-seq OMalley et al.(2016) MYB96_colamp_a	0.848	0.925
MYB96 M07154_2.00	Arabidopsis thaliana	YAMCHNCCAMCHAHHHHH	DDDDDTDGKTGGNDGKTR	Dap-seq OMalley et al.(2016) MYB96_col_b	0.848	0.925
ATY13 M07035_2.00	Arabidopsis thaliana	HAMCHMCCAMCHAHH	DDTDGKTGGKDGKTD	Dap-seq OMalley et al.(2016) ATY13_col_a	0.847	0.925
ATY13 M07036_2.00	Arabidopsis thaliana	HAMCHHCCAACHAHH	DDTDGTTGGDDGKTD	Dap-seq OMalley et al.(2016) ATY13_colamp_a	0.847	0.925
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
POPTR_0017s11880.1	Myb	14	61	KGPWTPEEDIILVSYIQEHGPGNWRAVPTSTGLLRCSKSCRLRWTNYL
POPTR_0017s11880.1	Myb	67	112	RGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNFWNTHL

Links
Other Myb/SANT family TFs
Other *Populus trichocarpa* TFs

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311 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action