POPTR_0018s04230 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0018s04230 T278517_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0018s04230.1 Myb 157 202

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0493s0270 Salix purpurea SapurV1A.0493s0270 N 0.853
POPTR_0006s29510 Populus trichocarpa POPTR_0006s29510 N 0.786
SapurV1A.0263s0050 Salix purpurea SapurV1A.0263s0050 N 0.786
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N 0.776
28179.m000458 Ricinus communis 28179.m000458 N 0.769
Cla014299 Citrullus lanatus Cla014299 N 0.765
MTR_7g076850 Medicago truncatula MTR_7g076850 N 0.749
evm.TU.supercontig_129.20 Carica papaya evm.TU.supercontig_129.20 N 0.747
gene05559-v1.0-hybrid Fragaria vesca gene05559-v1.0-hybrid N 0.736
Thhalv10010289m.g Eutrema salsugineum Thhalv10010289m.g N 0.730
Bo8g082820 Brassica oleracea Bo8g082820 N 0.728
Bo8g082840 Brassica oleracea Bo8g082840 N 0.728
cassava44568.m1 Manihot esculenta cassava44568.m1 N 0.728
Pm002284 Prunus mume Pm002284 N 0.725
PRUPE_ppa003947mg Prunus persica PRUPE_ppa003947mg N 0.725
Ciclev10026033m.g Citrus clementina Ciclev10026033m.g N 0.721
orange1.1g037355m.g Citrus sinensis orange1.1g037355m.g N 0.721
TCM_000914 Theobroma cacao TCM_000914 N 0.718
Lus10002159.g Linum usitatissimum Lus10002159.g N 0.716
Cucsa.103750 Cucumis sativus Cucsa.103750 N 0.716
Gorai.007G058000 Gossypium raimondii Gorai.007G058000 N 0.707
Carubv10016941m.g Capsella rubella Carubv10016941m.g N 0.698
Cagra.0612s0070 Capsella grandiflora Cagra.0612s0070 N 0.698
fgenesh2_kg.5__1710__AT3G53440.2 Arabidopsis lyrata fgenesh2_kg.5__1710__AT3G53440.2 N 0.695
AT3G53440 Arabidopsis thaliana AT3G53440 N 0.695
Bostr.11793s0050 Boechera stricta Bostr.11793s0050 N 0.695
cassava20168.m1 Manihot esculenta cassava20168.m1 N 0.694
MDP0000312273 Malus domestica MDP0000312273 N 0.694
PK06741.1 Cannabis sativa PK06741.1 N 0.692
AMTR_s00044p00144500 Amborella trichopoda AMTR_s00044p00144500 N 0.671
Gorai.003G035800 Gossypium raimondii Gorai.003G035800 N 0.669
Lus10039632.g Linum usitatissimum Lus10039632.g N 0.667