TF Information

POPTR_0019s05200 *(Populus trichocarpa)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	POPTR_0019s05200	T278536_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q2TCH0_PETHY M11072_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PH4_01	0.798	0.903
MYB3 M02288_2.00	Arabidopsis thaliana	NNYACCTACCN	NGGTAGGTRNN	PBM Weirauch et al.(2014) pTH7125	0.682	0.710
MYB83 M01073_2.00	Arabidopsis thaliana	YACCHACC	GGTDGGTR	PBM Sullivan et al.(2014) pTH7140	0.665	0.656
MYB83 M07066_2.00	Arabidopsis thaliana	YCACCAACHNH	DNDGTTGGTGR	Dap-seq OMalley et al.(2016) MYB83_col_a	0.665	0.656
MYB83 M07067_2.00	Arabidopsis thaliana	NCACCWAMCDNHNNN	NNNDNHGKTWGGTGN	Dap-seq OMalley et al.(2016) MYB83_colamp_a	0.665	0.656
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
POPTR_0019s05200.1	Myb	27	74	KGPWTPEEDELLANYIRKEGQGRWRTLPKRAGLLRCGKSCRLRWMNYL
POPTR_0019s05200.1	Myb	80	125	RGRIAPDEEDLILRLHRLLGNRWSMIAGRIPGRTDNEIKNYWNTCL

Links
Other Myb/SANT family TFs
Other *Populus trichocarpa* TFs

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309 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action